Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CCDC96Q2M329 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC96Q2M329 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 AC138907.8-201ENST00000623981 2256 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC96Q2M329 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC96Q2M329 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC96Q2M329 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC96Q2M329 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC96Q2M329 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC96Q2M329 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC96Q2M329 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 MIR551A-201ENST00000385042 96 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 AL009179.1-201ENST00000406085 265 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC96Q2M329 RNGTTP1-201ENST00000420965 728 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 NPM1P22-201ENST00000427761 952 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 HMGN1P8-201ENST00000463578 288 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 RN7SL583P-201ENST00000475692 287 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 UBA52P7-201ENST00000486088 380 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 EIF1P7-201ENST00000487533 337 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 AC093890.1-201ENST00000502554 540 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 PMS2P3-207ENST00000529061 717 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC96Q2M329 TRAV11-201ENST00000539512 339 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 AL359513.1-201ENST00000614364 557 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC96Q2M329 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 AC025470.1-201ENST00000510053 2032 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC96Q2M329 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 MT-RNR2-201ENST00000387347 1559 ntBASIC6.48□□□□□ -1.37
CCDC96Q2M329 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC96Q2M329 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 AL078621.3-201ENST00000623707 2042 ntBASIC6.47□□□□□ -1.37
CCDC96Q2M329 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 TRIM51GP-201ENST00000534741 1350 ntBASIC6.47□□□□□ -1.37
CCDC96Q2M329 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC96Q2M329 AC068870.1-201ENST00000563737 2455 ntBASIC6.47□□□□□ -1.37
CCDC96Q2M329 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC96Q2M329 RN7SKP6-201ENST00000364795 319 ntBASIC6.47□□□□□ -1.37
CCDC96Q2M329 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC96Q2M329 RNU1-77P-201ENST00000390868 162 ntBASIC6.47□□□□□ -1.37
CCDC96Q2M329 AC005042.1-201ENST00000393397 800 ntBASIC6.47□□□□□ -1.37
CCDC96Q2M329 AL355433.1-201ENST00000422804 300 ntBASIC6.47□□□□□ -1.37
CCDC96Q2M329 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 AC092106.1-201ENST00000444291 373 ntBASIC6.47□□□□□ -1.37
CCDC96Q2M329 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 FKBP1AP1-201ENST00000594588 318 ntBASIC6.47□□□□□ -1.37
CCDC96Q2M329 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 AC243960.7-201ENST00000623532 707 ntBASIC6.47□□□□□ -1.37
CCDC96Q2M329 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC96Q2M329 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC96Q2M329 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
CCDC96Q2M329 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.47□□□□□ -1.37
CCDC96Q2M329 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC96Q2M329 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
CCDC96Q2M329 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
CCDC96Q2M329 TCP11X1-202ENST00000622971 1372 ntBASIC6.46□□□□□ -1.37
CCDC96Q2M329 OR10AB1P-202ENST00000641219 1686 ntBASIC6.46□□□□□ -1.37
CCDC96Q2M329 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC96Q2M329 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC96Q2M329 MIR365B-201ENST00000362317 111 ntBASIC6.46□□□□□ -1.38
CCDC96Q2M329 RNU1-136P-201ENST00000384181 164 ntBASIC6.46□□□□□ -1.38
CCDC96Q2M329 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCDC96Q2M329 AC009804.1-201ENST00000400949 179 ntBASIC6.46□□□□□ -1.38
CCDC96Q2M329 BX510359.3-201ENST00000422168 306 ntBASIC6.46□□□□□ -1.38
CCDC96Q2M329 CYCSP6-201ENST00000434498 302 ntBASIC6.46□□□□□ -1.38
CCDC96Q2M329 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC96Q2M329 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC96Q2M329 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC96Q2M329 AL157385.1-201ENST00000446973 268 ntBASIC6.46□□□□□ -1.38
CCDC96Q2M329 RAB28P3-201ENST00000448325 597 ntBASIC6.46□□□□□ -1.38
CCDC96Q2M329 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC96Q2M329 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.46□□□□□ -1.38
CCDC96Q2M329 RNU6-319P-201ENST00000516025 108 ntBASIC6.46□□□□□ -1.38
CCDC96Q2M329 OR10D4P-201ENST00000525892 951 ntBASIC6.46□□□□□ -1.38
CCDC96Q2M329 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC96Q2M329 AC137627.1-201ENST00000545761 289 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms