Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SOX4Q06945 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SOX4Q06945 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 IL6STP1-201ENST00000346911 1020 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX4Q06945 PSMA6P1-201ENST00000400275 741 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 AL512430.2-201ENST00000406786 339 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 SNORA11.5-201ENST00000408163 128 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 AL139421.1-201ENST00000423010 169 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 OR6K4P-201ENST00000423179 955 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 ETF1P3-201ENST00000430422 1160 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX4Q06945 EMC3-AS1-205ENST00000438698 534 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 FDX1P2-201ENST00000450769 375 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 AC019084.1-201ENST00000457337 432 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX4Q06945 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX4Q06945 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX4Q06945 GM2AP2-201ENST00000491764 562 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 AC112484.3-201ENST00000505910 329 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX4Q06945 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX4Q06945 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.01□□□□□ -1.29
SOX4Q06945 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 MED28P5-201ENST00000528254 438 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX4Q06945 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX4Q06945 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.01□□□□□ -1.29
SOX4Q06945 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX4Q06945 AP005262.1-201ENST00000582646 997 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.01□□□□□ -1.29
SOX4Q06945 AC083899.3-201ENST00000603413 594 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 AC119501.1-201ENST00000603646 475 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 AL645933.2-201ENST00000606743 1207 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 AL159169.2-201ENST00000610061 1269 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX4Q06945 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 AC127502.3-201ENST00000636170 1206 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.01□□□□□ -1.29
SOX4Q06945 AL136531.3-201ENST00000624378 3658 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 AC123769.2-201ENST00000624332 5984 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 AC104162.1-201ENST00000430831 2382 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 AC011477.1-204ENST00000623416 1325 ntBASIC7.01□□□□□ -1.29
SOX4Q06945 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX4Q06945 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7□□□□□ -1.29
SOX4Q06945 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7□□□□□ -1.29
SOX4Q06945 AC105114.1-201ENST00000624795 1862 ntBASIC7□□□□□ -1.29
SOX4Q06945 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 CASC19-228ENST00000641414 1684 ntBASIC7□□□□□ -1.29
SOX4Q06945 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7□□□□□ -1.29
SOX4Q06945 RNY4P24-201ENST00000362735 96 ntBASIC7□□□□□ -1.29
SOX4Q06945 Y_RNA.70-201ENST00000362886 110 ntBASIC7□□□□□ -1.29
SOX4Q06945 snoZ40.1-201ENST00000364540 72 ntBASIC7□□□□□ -1.29
SOX4Q06945 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 RPL7P30-201ENST00000420888 709 ntBASIC7□□□□□ -1.29
SOX4Q06945 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC7□□□□□ -1.29
SOX4Q06945 ISCA1P1-201ENST00000426679 387 ntBASIC7□□□□□ -1.29
SOX4Q06945 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7□□□□□ -1.29
SOX4Q06945 USP9YP31-201ENST00000431405 881 ntBASIC7□□□□□ -1.29
SOX4Q06945 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7□□□□□ -1.29
SOX4Q06945 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7□□□□□ -1.29
SOX4Q06945 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC7□□□□□ -1.29
SOX4Q06945 CCNJP2-201ENST00000457810 1163 ntBASIC7□□□□□ -1.29
SOX4Q06945 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7□□□□□ -1.29
SOX4Q06945 AC037198.2-201ENST00000478845 733 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms