Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CLDN12P56749 AC017079.1-201ENST00000333650 415 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 RN7SKP171-201ENST00000364417 303 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN12P56749 MIR1275-201ENST00000408770 80 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN12P56749 AL133173.1-201ENST00000423458 397 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN12P56749 RPL12P17-201ENST00000432393 498 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 GSTM5P1-201ENST00000434751 660 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN12P56749 AC005297.1-201ENST00000444765 862 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 NPM1P29-201ENST00000483112 803 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CLDN12P56749 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.56□□□□□ -1.68
CLDN12P56749 SCARNA16.4-201ENST00000516956 187 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.56□□□□□ -1.68
CLDN12P56749 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.56□□□□□ -1.68
CLDN12P56749 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.56□□□□□ -1.68
CLDN12P56749 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 AC012616.1-201ENST00000600294 197 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 AC005479.3-201ENST00000602790 431 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 AL118522.2-201ENST00000616045 615 ntBASIC4.56□□□□□ -1.68
CLDN12P56749 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CLDN12P56749 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.56□□□□□ -1.68
CLDN12P56749 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CLDN12P56749 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLDN12P56749 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CLDN12P56749 AC021242.1-201ENST00000507315 2035 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 ZNF652P1-201ENST00000442420 1309 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
CLDN12P56749 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN12P56749 SUGT1P2-201ENST00000379452 992 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 OR13Z1P-201ENST00000416141 834 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 OR5M12P-201ENST00000423388 929 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN12P56749 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.55□□□□□ -1.68
CLDN12P56749 GTF3AP5-201ENST00000442645 697 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 EEF1B2P3-201ENST00000447718 678 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 AC002553.2-201ENST00000453217 340 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN12P56749 RN7SL346P-201ENST00000491561 294 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.55□□□□□ -1.68
CLDN12P56749 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN12P56749 SNORA43.3-201ENST00000517240 103 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.55□□□□□ -1.68
CLDN12P56749 KCTD9P6-201ENST00000522306 950 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN12P56749 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN12P56749 AC084759.1-201ENST00000561168 290 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN12P56749 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN12P56749 AC002310.3-201ENST00000569728 723 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.55□□□□□ -1.68
CLDN12P56749 AP002884.5-201ENST00000595053 1132 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.55□□□□□ -1.68
CLDN12P56749 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
CLDN12P56749 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.55□□□□□ -1.68
CLDN12P56749 AP000648.2-201ENST00000624182 404 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.55□□□□□ -1.68
CLDN12P56749 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.55□□□□□ -1.68
CLDN12P56749 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
CLDN12P56749 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CLDN12P56749 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLDN12P56749 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms