Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC068880.4-201ENST00000623082 495 ntBASIC6.08□□□□□ -1.44
COPAP53621 AC090506.2-201ENST00000624521 419 ntBASIC6.08□□□□□ -1.44
COPAP53621 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.08□□□□□ -1.44
COPAP53621 OR8G3P-202ENST00000641572 1255 ntBASIC6.08□□□□□ -1.44
COPAP53621 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.08□□□□□ -1.44
COPAP53621 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
COPAP53621 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 AC093775.1-201ENST00000624154 1868 ntBASIC6.08□□□□□ -1.44
COPAP53621 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.08□□□□□ -1.44
COPAP53621 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
COPAP53621 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 AL353796.1-201ENST00000561542 3241 ntBASIC6.08□□□□□ -1.44
COPAP53621 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COPAP53621 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.07□□□□□ -1.44
COPAP53621 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
COPAP53621 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COPAP53621 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
COPAP53621 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
COPAP53621 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
COPAP53621 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COPAP53621 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.07□□□□□ -1.44
COPAP53621 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
COPAP53621 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 RNA5SP242-201ENST00000364171 118 ntBASIC6.07□□□□□ -1.44
COPAP53621 RNA5SP500-201ENST00000364486 119 ntBASIC6.07□□□□□ -1.44
COPAP53621 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
COPAP53621 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
COPAP53621 AL158827.1-201ENST00000416300 391 ntBASIC6.07□□□□□ -1.44
COPAP53621 AC073310.1-201ENST00000423226 1033 ntBASIC6.07□□□□□ -1.44
COPAP53621 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.07□□□□□ -1.44
COPAP53621 AL645931.1-201ENST00000439737 410 ntBASIC6.07□□□□□ -1.44
COPAP53621 BMS1P10-201ENST00000443754 1120 ntBASIC6.07□□□□□ -1.44
COPAP53621 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.07□□□□□ -1.44
COPAP53621 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.07□□□□□ -1.44
COPAP53621 AC023245.1-201ENST00000468501 517 ntBASIC6.07□□□□□ -1.44
COPAP53621 AC118282.1-201ENST00000506408 765 ntBASIC6.07□□□□□ -1.44
COPAP53621 AC112518.2-201ENST00000508565 425 ntBASIC6.07□□□□□ -1.44
COPAP53621 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.07□□□□□ -1.44
COPAP53621 AC034244.2-201ENST00000514668 858 ntBASIC6.07□□□□□ -1.44
COPAP53621 AC020937.1-201ENST00000519677 1013 ntBASIC6.07□□□□□ -1.44
COPAP53621 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.07□□□□□ -1.44
COPAP53621 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.07□□□□□ -1.44
COPAP53621 AL356801.1-201ENST00000559320 294 ntBASIC6.07□□□□□ -1.44
COPAP53621 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.07□□□□□ -1.44
COPAP53621 MIR132-201ENST00000591554 101 ntBASIC6.07□□□□□ -1.44
COPAP53621 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.07□□□□□ -1.44
COPAP53621 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.07□□□□□ -1.44
COPAP53621 AC068620.3-201ENST00000602749 560 ntBASIC6.07□□□□□ -1.44
COPAP53621 AC027449.1-201ENST00000608890 407 ntBASIC6.07□□□□□ -1.44
COPAP53621 MIR6768-201ENST00000610734 72 ntBASIC6.07□□□□□ -1.44
COPAP53621 RNA5SP440-201ENST00000612665 119 ntBASIC6.07□□□□□ -1.44
COPAP53621 AL021918.2-201ENST00000613415 194 ntBASIC6.07□□□□□ -1.44
COPAP53621 AP003476.1-201ENST00000623984 516 ntBASIC6.07□□□□□ -1.44
COPAP53621 AL356118.1-201ENST00000635272 1078 ntBASIC6.07□□□□□ -1.44
COPAP53621 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COPAP53621 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.07□□□□□ -1.44
COPAP53621 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 AC027228.2-201ENST00000567141 2154 ntBASIC6.07□□□□□ -1.44
COPAP53621 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.07□□□□□ -1.44
COPAP53621 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPAP53621 AC006484.1-201ENST00000435086 1884 ntBASIC6.07□□□□□ -1.44
COPAP53621 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
COPAP53621 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
COPAP53621 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPAP53621 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
COPAP53621 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.06□□□□□ -1.44
COPAP53621 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.06□□□□□ -1.44
COPAP53621 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COPAP53621 MIR323A-201ENST00000362199 86 ntBASIC6.06□□□□□ -1.44
COPAP53621 U3.23-201ENST00000391132 200 ntBASIC6.06□□□□□ -1.44
COPAP53621 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COPAP53621 TAF9BP2-201ENST00000400856 499 ntBASIC6.06□□□□□ -1.44
COPAP53621 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
COPAP53621 RPS3AP2-201ENST00000407190 754 ntBASIC6.06□□□□□ -1.44
COPAP53621 RNU4-27P-201ENST00000410889 139 ntBASIC6.06□□□□□ -1.44
COPAP53621 AL354868.1-201ENST00000417077 482 ntBASIC6.06□□□□□ -1.44
COPAP53621 NIFKP3-201ENST00000417799 865 ntBASIC6.06□□□□□ -1.44
COPAP53621 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.06□□□□□ -1.44
COPAP53621 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.06□□□□□ -1.44
COPAP53621 AL731534.1-201ENST00000434711 269 ntBASIC6.06□□□□□ -1.44
COPAP53621 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.06□□□□□ -1.44
COPAP53621 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.06□□□□□ -1.44
COPAP53621 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.06□□□□□ -1.44
COPAP53621 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.06□□□□□ -1.44
COPAP53621 AC064862.4-201ENST00000442180 334 ntBASIC6.06□□□□□ -1.44
COPAP53621 MTCYBP21-201ENST00000443300 1113 ntBASIC6.06□□□□□ -1.44
COPAP53621 AP000281.1-201ENST00000444036 316 ntBASIC6.06□□□□□ -1.44
COPAP53621 AL353898.1-201ENST00000444055 238 ntBASIC6.06□□□□□ -1.44
COPAP53621 RPL36AP39-201ENST00000445859 318 ntBASIC6.06□□□□□ -1.44
COPAP53621 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms