Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 OR5AM1P-201ENST00000532136 1032 ntBASIC7.34□□□□□ -1.23
MSH6P52701 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.34□□□□□ -1.23
MSH6P52701 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC7.34□□□□□ -1.23
MSH6P52701 AL391358.1-201ENST00000605342 190 ntBASIC7.34□□□□□ -1.23
MSH6P52701 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
MSH6P52701 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.34□□□□□ -1.23
MSH6P52701 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
MSH6P52701 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
MSH6P52701 AL137141.1-201ENST00000624622 4836 ntBASIC7.34□□□□□ -1.23
MSH6P52701 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MSH6P52701 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
MSH6P52701 AL034549.2-201ENST00000618285 3373 ntBASIC7.34□□□□□ -1.23
MSH6P52701 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MSH6P52701 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
MSH6P52701 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MSH6P52701 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.34□□□□□ -1.23
MSH6P52701 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
MSH6P52701 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MSH6P52701 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.24
MSH6P52701 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
MSH6P52701 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
MSH6P52701 OR9G4-201ENST00000302957 984 ntBASIC7.33□□□□□ -1.24
MSH6P52701 AL121886.1-201ENST00000358609 435 ntBASIC7.33□□□□□ -1.24
MSH6P52701 RPS3AP23-201ENST00000401762 784 ntBASIC7.33□□□□□ -1.24
MSH6P52701 MIR1182-201ENST00000408363 97 ntBASIC7.33□□□□□ -1.24
MSH6P52701 RNGTTP1-201ENST00000420965 728 ntBASIC7.33□□□□□ -1.24
MSH6P52701 BX679664.2-201ENST00000439282 283 ntBASIC7.33□□□□□ -1.24
MSH6P52701 RPL36AP15-201ENST00000444514 266 ntBASIC7.33□□□□□ -1.24
MSH6P52701 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.33□□□□□ -1.24
MSH6P52701 RPL12P39-201ENST00000455456 496 ntBASIC7.33□□□□□ -1.24
MSH6P52701 snoU13.1-201ENST00000459157 104 ntBASIC7.33□□□□□ -1.24
MSH6P52701 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC7.33□□□□□ -1.24
MSH6P52701 AP002981.1-201ENST00000517692 975 ntBASIC7.33□□□□□ -1.24
MSH6P52701 MAL2-201ENST00000522112 573 ntTSL 4 BASIC7.33□□□□□ -1.24
MSH6P52701 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC7.33□□□□□ -1.24
MSH6P52701 GCSHP4-201ENST00000538792 439 ntBASIC7.33□□□□□ -1.24
MSH6P52701 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC7.33□□□□□ -1.24
MSH6P52701 AC005252.1-201ENST00000604518 1063 ntBASIC7.33□□□□□ -1.24
MSH6P52701 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
MSH6P52701 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MSH6P52701 BX284613.1-201ENST00000452221 1641 ntBASIC7.33□□□□□ -1.24
MSH6P52701 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MSH6P52701 ZNF969P-201ENST00000510345 2341 ntBASIC7.33□□□□□ -1.24
MSH6P52701 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC7.33□□□□□ -1.24
MSH6P52701 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
MSH6P52701 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MSH6P52701 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MSH6P52701 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
MSH6P52701 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MSH6P52701 AC114774.1-201ENST00000507410 1770 ntBASIC7.33□□□□□ -1.24
MSH6P52701 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.33□□□□□ -1.24
MSH6P52701 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.33□□□□□ -1.24
MSH6P52701 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.33□□□□□ -1.24
MSH6P52701 SNORA70.9-201ENST00000384370 135 ntBASIC7.33□□□□□ -1.24
MSH6P52701 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
MSH6P52701 DBIP1-201ENST00000401435 260 ntBASIC7.33□□□□□ -1.24
MSH6P52701 SNX10-203ENST00000409367 746 ntTSL 5 BASIC7.33□□□□□ -1.24
MSH6P52701 RNA5SP113-201ENST00000410486 84 ntBASIC7.33□□□□□ -1.24
MSH6P52701 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.33□□□□□ -1.24
MSH6P52701 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MSH6P52701 NUTF2P7-201ENST00000453086 375 ntBASIC7.33□□□□□ -1.24
MSH6P52701 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC7.33□□□□□ -1.24
MSH6P52701 RSU1P1-201ENST00000453416 441 ntBASIC7.33□□□□□ -1.24
MSH6P52701 RN7SKP122-201ENST00000515923 296 ntBASIC7.33□□□□□ -1.24
MSH6P52701 RN7SKP21-201ENST00000516503 220 ntBASIC7.33□□□□□ -1.24
MSH6P52701 AC012400.1-201ENST00000518452 381 ntBASIC7.33□□□□□ -1.24
MSH6P52701 SCARNA9-201ENST00000530422 353 ntBASIC7.33□□□□□ -1.24
MSH6P52701 OR7E128P-201ENST00000532736 1024 ntBASIC7.33□□□□□ -1.24
MSH6P52701 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.33□□□□□ -1.24
MSH6P52701 BNIP3P5-201ENST00000562290 498 ntBASIC7.33□□□□□ -1.24
MSH6P52701 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MSH6P52701 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
MSH6P52701 AP000769.2-201ENST00000602344 396 ntBASIC7.33□□□□□ -1.24
MSH6P52701 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.33□□□□□ -1.24
MSH6P52701 AL392048.1-201ENST00000613946 534 ntBASIC7.33□□□□□ -1.24
MSH6P52701 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MSH6P52701 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
MSH6P52701 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
MSH6P52701 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC7.32□□□□□ -1.24
MSH6P52701 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
MSH6P52701 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
MSH6P52701 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
MSH6P52701 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.32□□□□□ -1.24
MSH6P52701 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
MSH6P52701 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
MSH6P52701 AC092070.2-203ENST00000598377 3644 ntBASIC7.32□□□□□ -1.24
MSH6P52701 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.32□□□□□ -1.24
MSH6P52701 Z98755.1-201ENST00000407015 1384 ntBASIC7.32□□□□□ -1.24
MSH6P52701 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
MSH6P52701 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
MSH6P52701 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.32□□□□□ -1.24
MSH6P52701 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
MSH6P52701 GNG5P2-201ENST00000372054 207 ntBASIC7.32□□□□□ -1.24
MSH6P52701 AC004690.1-201ENST00000418216 328 ntBASIC7.32□□□□□ -1.24
MSH6P52701 OR52J1P-201ENST00000450596 932 ntBASIC7.32□□□□□ -1.24
MSH6P52701 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
MSH6P52701 COX6B1P5-201ENST00000509843 249 ntBASIC7.32□□□□□ -1.24
MSH6P52701 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.32□□□□□ -1.24
MSH6P52701 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.32□□□□□ -1.24
MSH6P52701 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms