Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
NEK3P51956 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
NEK3P51956 SUGT1P2-201ENST00000379452 992 ntBASIC6.14□□□□□ -1.43
NEK3P51956 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NEK3P51956 AL355615.1-201ENST00000406187 641 ntBASIC6.14□□□□□ -1.43
NEK3P51956 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.14□□□□□ -1.43
NEK3P51956 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NEK3P51956 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.14□□□□□ -1.43
NEK3P51956 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.14□□□□□ -1.43
NEK3P51956 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.14□□□□□ -1.43
NEK3P51956 REREP1Y-201ENST00000422655 198 ntBASIC6.14□□□□□ -1.43
NEK3P51956 AC013262.1-201ENST00000426710 252 ntBASIC6.14□□□□□ -1.43
NEK3P51956 REREP2Y-201ENST00000439103 200 ntBASIC6.14□□□□□ -1.43
NEK3P51956 AL353093.1-201ENST00000441292 436 ntBASIC6.14□□□□□ -1.43
NEK3P51956 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.14□□□□□ -1.43
NEK3P51956 ZNF619P1-201ENST00000446539 752 ntBASIC6.14□□□□□ -1.43
NEK3P51956 REG1CP-206ENST00000447469 496 ntBASIC6.14□□□□□ -1.43
NEK3P51956 AL162739.1-201ENST00000450606 307 ntBASIC6.14□□□□□ -1.43
NEK3P51956 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.14□□□□□ -1.43
NEK3P51956 AC092865.4-201ENST00000477936 615 ntBASIC6.14□□□□□ -1.43
NEK3P51956 AC093719.1-201ENST00000480427 441 ntBASIC6.14□□□□□ -1.43
NEK3P51956 CR383656.1-201ENST00000484916 377 ntBASIC6.14□□□□□ -1.43
NEK3P51956 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.14□□□□□ -1.43
NEK3P51956 AC093890.1-201ENST00000502554 540 ntBASIC6.14□□□□□ -1.43
NEK3P51956 NAMPTP2-201ENST00000505629 1115 ntBASIC6.14□□□□□ -1.43
NEK3P51956 TOMM22P4-201ENST00000511318 336 ntBASIC6.14□□□□□ -1.43
NEK3P51956 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.14□□□□□ -1.43
NEK3P51956 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.14□□□□□ -1.43
NEK3P51956 AC060775.1-201ENST00000518241 520 ntBASIC6.14□□□□□ -1.43
NEK3P51956 AC010476.1-201ENST00000519111 851 ntBASIC6.14□□□□□ -1.43
NEK3P51956 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.14□□□□□ -1.43
NEK3P51956 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.14□□□□□ -1.43
NEK3P51956 AP003717.3-201ENST00000544832 1180 ntBASIC6.14□□□□□ -1.43
NEK3P51956 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.14□□□□□ -1.43
NEK3P51956 AGGF1P9-201ENST00000561884 913 ntBASIC6.14□□□□□ -1.43
NEK3P51956 AC106730.2-201ENST00000566641 540 ntBASIC6.14□□□□□ -1.43
NEK3P51956 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NEK3P51956 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.14□□□□□ -1.43
NEK3P51956 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.14□□□□□ -1.43
NEK3P51956 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.14□□□□□ -1.43
NEK3P51956 AC141002.1-201ENST00000607025 279 ntBASIC6.14□□□□□ -1.43
NEK3P51956 AF129408.1-201ENST00000608767 431 ntBASIC6.14□□□□□ -1.43
NEK3P51956 AL391834.2-201ENST00000609982 546 ntBASIC6.14□□□□□ -1.43
NEK3P51956 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NEK3P51956 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.14□□□□□ -1.43
NEK3P51956 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.14□□□□□ -1.43
NEK3P51956 AC007275.1-201ENST00000621243 671 ntBASIC6.14□□□□□ -1.43
NEK3P51956 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
NEK3P51956 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
NEK3P51956 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.14□□□□□ -1.43
NEK3P51956 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.14□□□□□ -1.43
NEK3P51956 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
NEK3P51956 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
NEK3P51956 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NEK3P51956 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.14□□□□□ -1.43
NEK3P51956 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NEK3P51956 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NEK3P51956 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.13□□□□□ -1.43
NEK3P51956 DDX18P4-201ENST00000511690 1966 ntBASIC6.13□□□□□ -1.43
NEK3P51956 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.13□□□□□ -1.43
NEK3P51956 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NEK3P51956 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.13□□□□□ -1.43
NEK3P51956 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NEK3P51956 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NEK3P51956 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
NEK3P51956 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NEK3P51956 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
NEK3P51956 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NEK3P51956 AC023490.2-201ENST00000359859 470 ntBASIC6.13□□□□□ -1.43
NEK3P51956 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.13□□□□□ -1.43
NEK3P51956 HMGN1P20-201ENST00000411849 300 ntBASIC6.13□□□□□ -1.43
NEK3P51956 AL096829.1-201ENST00000413677 457 ntBASIC6.13□□□□□ -1.43
NEK3P51956 UBE2V1P9-201ENST00000414760 368 ntBASIC6.13□□□□□ -1.43
NEK3P51956 PTCD2P2-201ENST00000415579 1095 ntBASIC6.13□□□□□ -1.43
NEK3P51956 MTND2P15-201ENST00000418575 892 ntBASIC6.13□□□□□ -1.43
NEK3P51956 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.13□□□□□ -1.43
NEK3P51956 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.13□□□□□ -1.43
NEK3P51956 AC005077.1-201ENST00000449226 375 ntBASIC6.13□□□□□ -1.43
NEK3P51956 OSTCP1-201ENST00000455507 450 ntBASIC6.13□□□□□ -1.43
NEK3P51956 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NEK3P51956 RPL12P24-201ENST00000474907 486 ntBASIC6.13□□□□□ -1.43
NEK3P51956 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.13□□□□□ -1.43
NEK3P51956 TRBV5-2-201ENST00000489095 273 ntBASIC6.13□□□□□ -1.43
NEK3P51956 ST13P12-201ENST00000508958 1094 ntBASIC6.13□□□□□ -1.43
NEK3P51956 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.13□□□□□ -1.43
NEK3P51956 SCARNA18.1-201ENST00000516330 83 ntBASIC6.13□□□□□ -1.43
NEK3P51956 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NEK3P51956 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.13□□□□□ -1.43
NEK3P51956 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.13□□□□□ -1.43
NEK3P51956 AC087894.1-201ENST00000538359 518 ntBASIC6.13□□□□□ -1.43
NEK3P51956 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.13□□□□□ -1.43
NEK3P51956 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NEK3P51956 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NEK3P51956 AC018552.1-201ENST00000562099 811 ntBASIC6.13□□□□□ -1.43
NEK3P51956 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.13□□□□□ -1.43
NEK3P51956 MIR548Y-201ENST00000582739 110 ntBASIC6.13□□□□□ -1.43
NEK3P51956 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.13□□□□□ -1.43
NEK3P51956 AC025857.2-201ENST00000602711 238 ntBASIC6.13□□□□□ -1.43
NEK3P51956 BNIP3P35-201ENST00000604530 490 ntBASIC6.13□□□□□ -1.43
NEK3P51956 LSM1P2-201ENST00000604911 322 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms