Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 HNRNPCP1-201ENST00000556181 766 ntBASIC5.7□□□□□ -1.5
LHX1P48742 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.7□□□□□ -1.5
LHX1P48742 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.7□□□□□ -1.5
LHX1P48742 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.7□□□□□ -1.5
LHX1P48742 AC106730.2-201ENST00000566641 540 ntBASIC5.7□□□□□ -1.5
LHX1P48742 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.7□□□□□ -1.5
LHX1P48742 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.7□□□□□ -1.5
LHX1P48742 AL583832.1-201ENST00000603227 784 ntBASIC5.7□□□□□ -1.5
LHX1P48742 AC126915.2-201ENST00000610957 190 ntBASIC5.7□□□□□ -1.5
LHX1P48742 AP003400.3-201ENST00000624904 346 ntBASIC5.7□□□□□ -1.5
LHX1P48742 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.7□□□□□ -1.5
LHX1P48742 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
LHX1P48742 ZNF733P-202ENST00000444809 1573 ntBASIC5.7□□□□□ -1.5
LHX1P48742 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
LHX1P48742 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LHX1P48742 MSL3P1-202ENST00000440028 1468 ntBASIC5.7□□□□□ -1.5
LHX1P48742 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.7□□□□□ -1.5
LHX1P48742 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.7□□□□□ -1.5
LHX1P48742 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.69□□□□□ -1.5
LHX1P48742 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LHX1P48742 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LHX1P48742 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LHX1P48742 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LHX1P48742 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LHX1P48742 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LHX1P48742 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.69□□□□□ -1.5
LHX1P48742 RN7SKP186-201ENST00000365371 303 ntBASIC5.69□□□□□ -1.5
LHX1P48742 NPM1P10-201ENST00000398310 865 ntBASIC5.69□□□□□ -1.5
LHX1P48742 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.69□□□□□ -1.5
LHX1P48742 AC096644.3-201ENST00000416788 338 ntBASIC5.69□□□□□ -1.5
LHX1P48742 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.69□□□□□ -1.5
LHX1P48742 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LHX1P48742 AL359265.1-201ENST00000440296 795 ntBASIC5.69□□□□□ -1.5
LHX1P48742 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.69□□□□□ -1.5
LHX1P48742 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.69□□□□□ -1.5
LHX1P48742 AC016687.1-201ENST00000482574 353 ntBASIC5.69□□□□□ -1.5
LHX1P48742 AC015864.1-201ENST00000496512 544 ntBASIC5.69□□□□□ -1.5
LHX1P48742 RPS4XP20-201ENST00000505751 772 ntBASIC5.69□□□□□ -1.5
LHX1P48742 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.69□□□□□ -1.5
LHX1P48742 RNA5SP373-201ENST00000517271 95 ntBASIC5.69□□□□□ -1.5
LHX1P48742 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.69□□□□□ -1.5
LHX1P48742 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.69□□□□□ -1.5
LHX1P48742 HAUS8P1-201ENST00000549005 542 ntBASIC5.69□□□□□ -1.5
LHX1P48742 NPM1P5-201ENST00000557228 838 ntBASIC5.69□□□□□ -1.5
LHX1P48742 NMNAT1P5-201ENST00000559657 841 ntBASIC5.69□□□□□ -1.5
LHX1P48742 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.69□□□□□ -1.5
LHX1P48742 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LHX1P48742 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.69□□□□□ -1.5
LHX1P48742 AC125494.2-201ENST00000602431 657 ntBASIC5.69□□□□□ -1.5
LHX1P48742 AC013244.1-201ENST00000604279 193 ntBASIC5.69□□□□□ -1.5
LHX1P48742 AC009027.1-201ENST00000604510 479 ntBASIC5.69□□□□□ -1.5
LHX1P48742 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.69□□□□□ -1.5
LHX1P48742 AC244107.2-201ENST00000611773 76 ntBASIC5.69□□□□□ -1.5
LHX1P48742 AC090527.3-201ENST00000619041 548 ntBASIC5.69□□□□□ -1.5
LHX1P48742 CYP4F35P-202ENST00000636121 390 ntBASIC5.69□□□□□ -1.5
LHX1P48742 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LHX1P48742 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LHX1P48742 AL353796.1-201ENST00000561542 3241 ntBASIC5.69□□□□□ -1.5
LHX1P48742 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LHX1P48742 AC011493.1-201ENST00000596753 1632 ntBASIC5.69□□□□□ -1.5
LHX1P48742 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.69□□□□□ -1.5
LHX1P48742 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LHX1P48742 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.69□□□□□ -1.5
LHX1P48742 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LHX1P48742 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LHX1P48742 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
LHX1P48742 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LHX1P48742 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX1P48742 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX1P48742 AC004656.1-201ENST00000568479 4951 ntBASIC5.68□□□□□ -1.5
LHX1P48742 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LHX1P48742 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LHX1P48742 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.68□□□□□ -1.5
LHX1P48742 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.68□□□□□ -1.5
LHX1P48742 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX1P48742 MIR105-1-201ENST00000385222 81 ntBASIC5.68□□□□□ -1.5
LHX1P48742 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LHX1P48742 AL133482.1-201ENST00000415988 498 ntBASIC5.68□□□□□ -1.5
LHX1P48742 BMS1P13-201ENST00000417301 885 ntBASIC5.68□□□□□ -1.5
LHX1P48742 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LHX1P48742 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.68□□□□□ -1.5
LHX1P48742 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.68□□□□□ -1.5
LHX1P48742 FAR2P1-206ENST00000449736 709 ntBASIC5.68□□□□□ -1.5
LHX1P48742 AC079168.1-201ENST00000458741 345 ntBASIC5.68□□□□□ -1.5
LHX1P48742 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.68□□□□□ -1.5
LHX1P48742 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LHX1P48742 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX1P48742 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LHX1P48742 RN7SL727P-201ENST00000482164 296 ntBASIC5.68□□□□□ -1.5
LHX1P48742 AC058823.1-201ENST00000485315 474 ntBASIC5.68□□□□□ -1.5
LHX1P48742 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.68□□□□□ -1.5
LHX1P48742 AC093763.2-201ENST00000505334 1223 ntBASIC5.68□□□□□ -1.5
LHX1P48742 AC138409.2-202ENST00000507274 458 ntBASIC5.68□□□□□ -1.5
LHX1P48742 RNU6-362P-201ENST00000516736 90 ntBASIC5.68□□□□□ -1.5
LHX1P48742 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.68□□□□□ -1.5
LHX1P48742 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LHX1P48742 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.68□□□□□ -1.5
LHX1P48742 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.68□□□□□ -1.5
LHX1P48742 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.68□□□□□ -1.5
LHX1P48742 MIR7853-201ENST00000584820 132 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms