Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CASQ1P31415 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CASQ1P31415 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
CASQ1P31415 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.72□□□□□ -1.49
CASQ1P31415 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.72□□□□□ -1.49
CASQ1P31415 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CASQ1P31415 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.72□□□□□ -1.49
CASQ1P31415 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.72□□□□□ -1.49
CASQ1P31415 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CASQ1P31415 AC005332.5-201ENST00000591222 2919 ntBASIC5.71□□□□□ -1.49
CASQ1P31415 AP001273.1-201ENST00000624493 3152 ntBASIC5.71□□□□□ -1.49
CASQ1P31415 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CASQ1P31415 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
CASQ1P31415 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.71□□□□□ -1.49
CASQ1P31415 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.71□□□□□ -1.5
CASQ1P31415 SNORA64.1-201ENST00000362600 132 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 RNU1-74P-201ENST00000384108 171 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 AL589994.1-201ENST00000404962 340 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 RPS3AP2-201ENST00000407190 754 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CASQ1P31415 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.71□□□□□ -1.5
CASQ1P31415 MARK2P12-201ENST00000420129 585 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.71□□□□□ -1.5
CASQ1P31415 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.71□□□□□ -1.5
CASQ1P31415 HMGB3P9-201ENST00000441799 583 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.71□□□□□ -1.5
CASQ1P31415 RBMY2AP-201ENST00000445405 1157 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.71□□□□□ -1.5
CASQ1P31415 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.71□□□□□ -1.5
CASQ1P31415 RBMY2CP-201ENST00000448575 1157 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 RBMY2DP-202ENST00000448881 1157 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.71□□□□□ -1.5
CASQ1P31415 RBMY2BP-202ENST00000451071 1156 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.71□□□□□ -1.5
CASQ1P31415 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CASQ1P31415 AC092754.1-201ENST00000472975 479 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 AC087672.1-201ENST00000479876 766 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 RPS3AP15-201ENST00000483874 781 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 RN7SL814P-201ENST00000487715 300 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 ARL4AP1-201ENST00000503220 705 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 HMGB3P16-201ENST00000508037 287 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 AC093325.1-201ENST00000508378 326 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.71□□□□□ -1.5
CASQ1P31415 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.71□□□□□ -1.5
CASQ1P31415 SULT1C2P2-201ENST00000562517 294 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 AC105036.1-201ENST00000566222 271 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.71□□□□□ -1.5
CASQ1P31415 AC131238.1-201ENST00000617135 328 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 AL390318.1-201ENST00000624564 687 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.71□□□□□ -1.5
CASQ1P31415 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CASQ1P31415 CASC19-204ENST00000641001 2055 ntBASIC5.71□□□□□ -1.5
CASQ1P31415 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CASQ1P31415 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.71□□□□□ -1.5
CASQ1P31415 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CASQ1P31415 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CASQ1P31415 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CASQ1P31415 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.7□□□□□ -1.5
CASQ1P31415 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CASQ1P31415 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CASQ1P31415 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CASQ1P31415 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CASQ1P31415 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CASQ1P31415 AL590609.2-201ENST00000421430 368 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 FAM183DP-201ENST00000421987 399 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 AL022331.1-201ENST00000429025 477 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 KCTD9P1-201ENST00000430462 1167 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 ATP5LP2-201ENST00000440646 311 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.7□□□□□ -1.5
CASQ1P31415 RPL6P30-201ENST00000443382 862 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 RPL5P7-201ENST00000444235 813 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 AC022795.1-201ENST00000473808 480 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 AC022215.1-201ENST00000481770 362 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CASQ1P31415 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.7□□□□□ -1.5
CASQ1P31415 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.7□□□□□ -1.5
CASQ1P31415 AC138938.1-201ENST00000515431 782 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 RNA5SP228-201ENST00000516232 133 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CASQ1P31415 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.7□□□□□ -1.5
CASQ1P31415 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.7□□□□□ -1.5
CASQ1P31415 AC133552.5-201ENST00000604266 540 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 AC023813.4-201ENST00000607580 580 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 AC092266.1-201ENST00000610958 165 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 AC129915.3-201ENST00000634128 948 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 AL596275.2-207ENST00000641188 675 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 AL596275.2-204ENST00000641628 552 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 AL596275.2-206ENST00000641957 626 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CASQ1P31415 IFIT1P1-201ENST00000400497 1449 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CASQ1P31415 AC063976.2-201ENST00000425667 3556 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 KARSP1-201ENST00000451871 1752 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 AC023421.1-201ENST00000590535 1785 ntBASIC5.7□□□□□ -1.5
CASQ1P31415 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CASQ1P31415 AC120338.1-201ENST00000625074 1541 ntBASIC5.69□□□□□ -1.5
CASQ1P31415 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CASQ1P31415 NEPNP-201ENST00000404786 1371 ntBASIC5.69□□□□□ -1.5
CASQ1P31415 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms