Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MIR4480-201ENST00000582492 71 ntBASIC5.38□□□□□ -1.55
HMGA1P17096 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGA1P17096 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGA1P17096 AC073575.2-201ENST00000614212 627 ntBASIC5.38□□□□□ -1.55
HMGA1P17096 AC091953.3-201ENST00000623220 236 ntBASIC5.38□□□□□ -1.55
HMGA1P17096 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGA1P17096 AC007996.1-201ENST00000620414 2821 ntBASIC5.38□□□□□ -1.55
HMGA1P17096 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGA1P17096 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.38□□□□□ -1.55
HMGA1P17096 AC007159.1-201ENST00000566529 4706 ntBASIC5.38□□□□□ -1.55
HMGA1P17096 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGA1P17096 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGA1P17096 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGA1P17096 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGA1P17096 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGA1P17096 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGA1P17096 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGA1P17096 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGA1P17096 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGA1P17096 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
HMGA1P17096 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGA1P17096 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGA1P17096 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGA1P17096 RNA5SP428-201ENST00000365129 132 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 AL139128.1-201ENST00000413921 941 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 AL158827.1-201ENST00000416300 391 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 OR2AM1P-201ENST00000422137 422 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 RPL7AP49-201ENST00000429522 581 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGA1P17096 AL591438.1-201ENST00000433508 581 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 AL772161.1-201ENST00000439130 476 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGA1P17096 Z80107.2-201ENST00000445127 392 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 AC020779.1-201ENST00000478757 796 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGA1P17096 AC097173.1-201ENST00000505862 819 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 COX6B1P5-201ENST00000509843 249 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGA1P17096 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGA1P17096 SCARNA9-201ENST00000530422 353 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGA1P17096 AC105254.2-201ENST00000603636 436 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 MEMO1P5-201ENST00000604810 406 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 AC100827.5-201ENST00000615883 426 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 MIR6839-201ENST00000620425 113 ntBASIC5.37□□□□□ -1.55
HMGA1P17096 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGA1P17096 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGA1P17096 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGA1P17096 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HMGA1P17096 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGA1P17096 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGA1P17096 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGA1P17096 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
HMGA1P17096 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGA1P17096 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGA1P17096 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGA1P17096 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGA1P17096 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HMGA1P17096 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGA1P17096 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGA1P17096 RN7SKP145-201ENST00000363291 303 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 RN7SKP103-201ENST00000363848 320 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGA1P17096 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGA1P17096 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGA1P17096 BX323845.1-201ENST00000432417 179 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 AL049745.1-201ENST00000433953 286 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGA1P17096 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGA1P17096 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGA1P17096 RPL7P16-201ENST00000479738 738 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 IGLV2-34-201ENST00000490007 283 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGA1P17096 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGA1P17096 RNA5SP43-201ENST00000516559 110 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 CDH12P4-201ENST00000517835 295 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 CDH12P3-201ENST00000517935 295 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 CDH12P1-201ENST00000518435 295 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGA1P17096 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGA1P17096 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGA1P17096 PCNPP1-201ENST00000552501 511 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGA1P17096 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
HMGA1P17096 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGA1P17096 AC011487.3-201ENST00000593607 453 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.36□□□□□ -1.55
HMGA1P17096 AC005084.1-201ENST00000605160 304 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGA1P17096 AC007786.3-201ENST00000615154 596 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGA1P17096 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGA1P17096 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
HMGA1P17096 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGA1P17096 AP000547.3-204ENST00000588548 2523 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 ABCC13-202ENST00000463099 3842 ntBASIC5.36□□□□□ -1.55
HMGA1P17096 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HMGA1P17096 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms