Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC022164.1-201ENST00000568767 2673 ntBASIC7.14□□□□□ -1.27
HMGB1P09429 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.13□□□□□ -1.27
HMGB1P09429 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.13□□□□□ -1.27
HMGB1P09429 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.13□□□□□ -1.27
HMGB1P09429 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.13□□□□□ -1.27
HMGB1P09429 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.13□□□□□ -1.27
HMGB1P09429 TCP11X1-202ENST00000622971 1372 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGB1P09429 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
HMGB1P09429 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGB1P09429 ATP5F1P6-201ENST00000402768 767 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 MTATP6P31-201ENST00000406985 692 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGB1P09429 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.13□□□□□ -1.27
HMGB1P09429 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.13□□□□□ -1.27
HMGB1P09429 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGB1P09429 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.13□□□□□ -1.27
HMGB1P09429 AL139158.1-201ENST00000424719 340 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 AC245884.2-201ENST00000426257 404 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 ELOCP11-201ENST00000436690 332 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 RPL5P7-201ENST00000444235 813 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 ELOCP16-201ENST00000444494 332 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 AL161747.1-201ENST00000480068 358 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.13□□□□□ -1.27
HMGB1P09429 OR7E99P-201ENST00000505750 922 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 AC112484.3-201ENST00000505910 329 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 PGBD4P4-201ENST00000509673 613 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGB1P09429 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGB1P09429 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.13□□□□□ -1.27
HMGB1P09429 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGB1P09429 CSNK1A1P1-202ENST00000563423 981 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 AC138207.8-204ENST00000579588 527 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 AL008729.2-201ENST00000606393 473 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.13□□□□□ -1.27
HMGB1P09429 AC092681.3-201ENST00000609463 678 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 AL512652.1-201ENST00000619006 500 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 AC099654.15-201ENST00000639802 509 ntBASIC7.13□□□□□ -1.27
HMGB1P09429 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
HMGB1P09429 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGB1P09429 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGB1P09429 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HMGB1P09429 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGB1P09429 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGB1P09429 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGB1P09429 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGB1P09429 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGB1P09429 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
HMGB1P09429 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HMGB1P09429 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P09429 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
HMGB1P09429 RBPJP7-201ENST00000442803 1447 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 RBPJP5-201ENST00000449433 1447 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P09429 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGB1P09429 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P09429 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
HMGB1P09429 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P09429 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
HMGB1P09429 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HMGB1P09429 TMSB4XP2-201ENST00000335179 210 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 RNU4-2-201ENST00000365668 141 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
HMGB1P09429 AC245096.1-201ENST00000413104 546 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 AL158825.1-201ENST00000414735 521 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 NMD3P2-201ENST00000421815 761 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P09429 RPL7P55-201ENST00000450522 746 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P09429 SDC4P-201ENST00000453285 601 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 ACA64.4-201ENST00000459070 127 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 AC078857.1-201ENST00000469870 667 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 AC092865.4-201ENST00000477936 615 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 RPL9P15-201ENST00000491096 532 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P09429 SNORA26.10-201ENST00000516427 141 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 HMGB1P23-201ENST00000518743 568 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P09429 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P09429 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P09429 AC092332.1-201ENST00000563684 829 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P09429 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGB1P09429 AC005828.7-201ENST00000607331 556 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.12□□□□□ -1.27
HMGB1P09429 AC009704.2-201ENST00000618739 483 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 AC111152.1-202ENST00000635848 339 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.12□□□□□ -1.27
HMGB1P09429 AL591135.1-201ENST00000401578 5914 ntBASIC7.12□□□□□ -1.27
HMGB1P09429 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGB1P09429 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HMGB1P09429 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HMGB1P09429 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGB1P09429 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGB1P09429 CARF-208ENST00000428585 2513 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGB1P09429 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P09429 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P09429 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
HMGB1P09429 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGB1P09429 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms