Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.58□□□□□ -1.52
RETP07949 AL121839.2-201ENST00000565058 6943 ntBASIC5.58□□□□□ -1.52
RETP07949 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RETP07949 AC020656.2-201ENST00000613291 5309 ntBASIC5.58□□□□□ -1.52
RETP07949 AL137141.1-201ENST00000624622 4836 ntBASIC5.58□□□□□ -1.52
RETP07949 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
RETP07949 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.58□□□□□ -1.52
RETP07949 U3.2-201ENST00000362981 210 ntBASIC5.58□□□□□ -1.52
RETP07949 RNA5SP30-201ENST00000365552 115 ntBASIC5.58□□□□□ -1.52
RETP07949 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.58□□□□□ -1.52
RETP07949 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.58□□□□□ -1.52
RETP07949 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.58□□□□□ -1.52
RETP07949 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.58□□□□□ -1.52
RETP07949 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RETP07949 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.58□□□□□ -1.52
RETP07949 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.58□□□□□ -1.52
RETP07949 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.58□□□□□ -1.52
RETP07949 AL035090.1-201ENST00000454835 332 ntBASIC5.58□□□□□ -1.52
RETP07949 RNU1-88P-201ENST00000459274 128 ntBASIC5.58□□□□□ -1.52
RETP07949 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.58□□□□□ -1.52
RETP07949 AC091544.1-201ENST00000484702 348 ntBASIC5.58□□□□□ -1.52
RETP07949 AC111000.6-201ENST00000514471 709 ntBASIC5.58□□□□□ -1.52
RETP07949 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.58□□□□□ -1.52
RETP07949 AP004607.2-201ENST00000533949 322 ntBASIC5.58□□□□□ -1.52
RETP07949 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.58□□□□□ -1.52
RETP07949 AC078878.1-201ENST00000539832 958 ntBASIC5.58□□□□□ -1.52
RETP07949 AC084824.2-201ENST00000548906 345 ntBASIC5.58□□□□□ -1.52
RETP07949 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.58□□□□□ -1.52
RETP07949 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.58□□□□□ -1.52
RETP07949 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.58□□□□□ -1.52
RETP07949 AC005084.1-201ENST00000605160 304 ntBASIC5.58□□□□□ -1.52
RETP07949 MIR378J-201ENST00000611988 109 ntBASIC5.58□□□□□ -1.52
RETP07949 AL118522.2-201ENST00000616045 615 ntBASIC5.58□□□□□ -1.52
RETP07949 AL353662.3-201ENST00000625131 237 ntBASIC5.58□□□□□ -1.52
RETP07949 LINC01739-205ENST00000641890 573 ntBASIC5.58□□□□□ -1.52
RETP07949 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RETP07949 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RETP07949 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RETP07949 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RETP07949 PANDAR-201ENST00000629595 1506 ntBASIC5.58□□□□□ -1.52
RETP07949 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.58□□□□□ -1.52
RETP07949 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.58□□□□□ -1.52
RETP07949 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RETP07949 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RETP07949 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RETP07949 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RETP07949 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RETP07949 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RETP07949 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.57□□□□□ -1.52
RETP07949 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.57□□□□□ -1.52
RETP07949 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RETP07949 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RETP07949 RNA5SP339-201ENST00000390987 122 ntBASIC5.57□□□□□ -1.52
RETP07949 CYB5AP4-201ENST00000396692 399 ntBASIC5.57□□□□□ -1.52
RETP07949 U3.36-201ENST00000408418 213 ntBASIC5.57□□□□□ -1.52
RETP07949 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.57□□□□□ -1.52
RETP07949 AC138761.5-201ENST00000433967 325 ntBASIC5.57□□□□□ -1.52
RETP07949 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RETP07949 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.57□□□□□ -1.52
RETP07949 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.57□□□□□ -1.52
RETP07949 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.57□□□□□ -1.52
RETP07949 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.57□□□□□ -1.52
RETP07949 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.57□□□□□ -1.52
RETP07949 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.57□□□□□ -1.52
RETP07949 AC013701.1-201ENST00000522657 465 ntBASIC5.57□□□□□ -1.52
RETP07949 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RETP07949 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.57□□□□□ -1.52
RETP07949 BLZF2P-201ENST00000553776 1130 ntBASIC5.57□□□□□ -1.52
RETP07949 OR11J2P-201ENST00000555298 907 ntBASIC5.57□□□□□ -1.52
RETP07949 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.57□□□□□ -1.52
RETP07949 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.57□□□□□ -1.52
RETP07949 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.57□□□□□ -1.52
RETP07949 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.57□□□□□ -1.52
RETP07949 AL513327.3-201ENST00000602618 469 ntBASIC5.57□□□□□ -1.52
RETP07949 AL022394.1-201ENST00000606979 292 ntBASIC5.57□□□□□ -1.52
RETP07949 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.57□□□□□ -1.52
RETP07949 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.57□□□□□ -1.52
RETP07949 CASC19-281ENST00000642118 1554 ntBASIC5.57□□□□□ -1.52
RETP07949 AC109446.4-201ENST00000623235 2755 ntBASIC5.57□□□□□ -1.52
RETP07949 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RETP07949 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.57□□□□□ -1.52
RETP07949 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RETP07949 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RETP07949 AC239868.2-201ENST00000564237 4527 ntBASIC5.56□□□□□ -1.52
RETP07949 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RETP07949 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RETP07949 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RETP07949 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.56□□□□□ -1.52
RETP07949 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.56□□□□□ -1.52
RETP07949 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.56□□□□□ -1.52
RETP07949 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RETP07949 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.56□□□□□ -1.52
RETP07949 RNU1-43P-201ENST00000365052 165 ntBASIC5.56□□□□□ -1.52
RETP07949 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
RETP07949 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RETP07949 MIR551A-201ENST00000385042 96 ntBASIC5.56□□□□□ -1.52
RETP07949 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.56□□□□□ -1.52
RETP07949 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.56□□□□□ -1.52
RETP07949 RPS27AP6-201ENST00000427962 448 ntBASIC5.56□□□□□ -1.52
RETP07949 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms