Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC4.89□□□□□ -1.63
SPTA1P02549 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.89□□□□□ -1.63
SPTA1P02549 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SPTA1P02549 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.89□□□□□ -1.63
SPTA1P02549 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.89□□□□□ -1.63
SPTA1P02549 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.89□□□□□ -1.63
SPTA1P02549 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
SPTA1P02549 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
SPTA1P02549 MIR208A-201ENST00000362287 71 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 MIR134-201ENST00000385258 73 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 HSPA8P15-201ENST00000401676 786 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 NUDT19P3-201ENST00000404698 555 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.88□□□□□ -1.63
SPTA1P02549 BNIP3P19-201ENST00000605397 577 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
SPTA1P02549 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SPTA1P02549 OR52H1-202ENST00000641796 1061 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 AC013268.3-201ENST00000262716 2324 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SPTA1P02549 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SPTA1P02549 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.88□□□□□ -1.63
SPTA1P02549 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SPTA1P02549 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.88□□□□□ -1.63
SPTA1P02549 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SPTA1P02549 USP9YP3-201ENST00000434481 1766 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SPTA1P02549 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.88□□□□□ -1.63
SPTA1P02549 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 AL731534.1-201ENST00000434711 269 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.88□□□□□ -1.63
SPTA1P02549 AC104634.1-201ENST00000452720 462 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 AC021074.2-201ENST00000468434 172 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 AC015864.1-201ENST00000496512 544 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 SCARNA16.4-201ENST00000516956 187 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 AC009117.1-201ENST00000563948 554 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 MIR132-201ENST00000591554 101 ntBASIC4.88□□□□□ -1.63
SPTA1P02549 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.88□□□□□ -1.63
SPTA1P02549 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
SPTA1P02549 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SPTA1P02549 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SPTA1P02549 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SPTA1P02549 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SPTA1P02549 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SPTA1P02549 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SPTA1P02549 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SPTA1P02549 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.88□□□□□ -1.63
SPTA1P02549 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.88□□□□□ -1.63
SPTA1P02549 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SPTA1P02549 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SPTA1P02549 INTS6P1-201ENST00000504674 2530 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SPTA1P02549 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 RN7SKP151-201ENST00000410230 316 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 AC119751.6-201ENST00000416712 186 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.87□□□□□ -1.63
SPTA1P02549 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.87□□□□□ -1.63
SPTA1P02549 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.87□□□□□ -1.63
SPTA1P02549 AC009127.1-201ENST00000467090 155 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.87□□□□□ -1.63
SPTA1P02549 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC4.87□□□□□ -1.63
SPTA1P02549 AC005000.1-201ENST00000536192 288 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.87□□□□□ -1.63
SPTA1P02549 MIR4444-1-201ENST00000581696 74 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 MIR4444-2-201ENST00000584390 74 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 AC125494.2-201ENST00000602431 657 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 AL031320.1-201ENST00000604177 357 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 AC013731.1-201ENST00000604340 883 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 AC005858.4-201ENST00000623191 700 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 MIR6830-201ENST00000636015 70 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.87□□□□□ -1.63
SPTA1P02549 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.87□□□□□ -1.63
SPTA1P02549 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
SPTA1P02549 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.87□□□□□ -1.63
SPTA1P02549 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.87□□□□□ -1.63
SPTA1P02549 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
SPTA1P02549 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.87□□□□□ -1.63
SPTA1P02549 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.87□□□□□ -1.63
SPTA1P02549 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.87□□□□□ -1.63
SPTA1P02549 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.87□□□□□ -1.63
SPTA1P02549 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.87□□□□□ -1.63
SPTA1P02549 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.87□□□□□ -1.63
SPTA1P02549 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.87□□□□□ -1.63
SPTA1P02549 GCSHP4-201ENST00000538792 439 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.87□□□□□ -1.63
SPTA1P02549 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.87□□□□□ -1.63
SPTA1P02549 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SPTA1P02549 AC021483.2-201ENST00000567415 758 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 AC073575.2-201ENST00000614212 627 ntBASIC4.87□□□□□ -1.63
SPTA1P02549 AL356752.1-201ENST00000615844 593 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms