Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 RNA5SP231-201ENST00000410496 138 ntBASIC5.23□□□□□ -1.57
SNX3O60493 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.23□□□□□ -1.57
SNX3O60493 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.23□□□□□ -1.57
SNX3O60493 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.23□□□□□ -1.57
SNX3O60493 BX284632.2-201ENST00000421091 399 ntBASIC5.23□□□□□ -1.57
SNX3O60493 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX3O60493 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.23□□□□□ -1.57
SNX3O60493 GAPDHP58-201ENST00000438477 1006 ntBASIC5.23□□□□□ -1.57
SNX3O60493 AL512605.1-202ENST00000441919 381 ntBASIC5.23□□□□□ -1.57
SNX3O60493 AC245291.3-201ENST00000443400 292 ntBASIC5.23□□□□□ -1.57
SNX3O60493 AL359955.2-201ENST00000445380 353 ntBASIC5.23□□□□□ -1.57
SNX3O60493 AC097463.1-201ENST00000447288 481 ntBASIC5.23□□□□□ -1.57
SNX3O60493 RAB28P3-201ENST00000448325 597 ntBASIC5.23□□□□□ -1.57
SNX3O60493 RPL31P20-201ENST00000449593 360 ntBASIC5.23□□□□□ -1.57
SNX3O60493 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 AC092754.1-201ENST00000472975 479 ntBASIC5.23□□□□□ -1.57
SNX3O60493 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.23□□□□□ -1.57
SNX3O60493 AK4P6-201ENST00000505168 528 ntBASIC5.23□□□□□ -1.57
SNX3O60493 AC108103.1-201ENST00000511286 446 ntBASIC5.23□□□□□ -1.57
SNX3O60493 SCARNA18.1-201ENST00000516330 83 ntBASIC5.23□□□□□ -1.57
SNX3O60493 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX3O60493 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SNX3O60493 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SNX3O60493 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.23□□□□□ -1.57
SNX3O60493 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.23□□□□□ -1.57
SNX3O60493 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX3O60493 AC012414.2-201ENST00000559474 187 ntBASIC5.23□□□□□ -1.57
SNX3O60493 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.23□□□□□ -1.57
SNX3O60493 AC015802.5-201ENST00000607478 399 ntBASIC5.23□□□□□ -1.57
SNX3O60493 MIR6793-201ENST00000612376 63 ntBASIC5.23□□□□□ -1.57
SNX3O60493 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.23□□□□□ -1.57
SNX3O60493 MIR6070-201ENST00000613967 103 ntBASIC5.23□□□□□ -1.57
SNX3O60493 AC104307.1-201ENST00000616142 196 ntBASIC5.23□□□□□ -1.57
SNX3O60493 AC108359.1-201ENST00000616451 1211 ntBASIC5.23□□□□□ -1.57
SNX3O60493 MIR8069-1-201ENST00000616627 86 ntBASIC5.23□□□□□ -1.57
SNX3O60493 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.23□□□□□ -1.57
SNX3O60493 MIR8069-2-201ENST00000621412 86 ntBASIC5.23□□□□□ -1.57
SNX3O60493 AL357140.4-201ENST00000636827 412 ntBASIC5.23□□□□□ -1.57
SNX3O60493 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.23□□□□□ -1.57
SNX3O60493 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SNX3O60493 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.23□□□□□ -1.57
SNX3O60493 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.23□□□□□ -1.57
SNX3O60493 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SNX3O60493 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
SNX3O60493 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.22□□□□□ -1.57
SNX3O60493 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SNX3O60493 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.22□□□□□ -1.57
SNX3O60493 SNORA51.9-201ENST00000384295 124 ntBASIC5.22□□□□□ -1.57
SNX3O60493 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX3O60493 CXADRP1-201ENST00000398098 1095 ntBASIC5.22□□□□□ -1.57
SNX3O60493 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX3O60493 U3.32-201ENST00000408116 212 ntBASIC5.22□□□□□ -1.57
SNX3O60493 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.22□□□□□ -1.57
SNX3O60493 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX3O60493 RPL12P17-201ENST00000432393 498 ntBASIC5.22□□□□□ -1.57
SNX3O60493 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.22□□□□□ -1.57
SNX3O60493 CFL1P4-201ENST00000451536 498 ntBASIC5.22□□□□□ -1.57
SNX3O60493 AC073073.1-201ENST00000493920 463 ntBASIC5.22□□□□□ -1.57
SNX3O60493 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.22□□□□□ -1.57
SNX3O60493 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.22□□□□□ -1.57
SNX3O60493 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX3O60493 RN7SKP46-201ENST00000515942 234 ntBASIC5.22□□□□□ -1.57
SNX3O60493 RNU6-319P-201ENST00000516025 108 ntBASIC5.22□□□□□ -1.57
SNX3O60493 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.22□□□□□ -1.57
SNX3O60493 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SNX3O60493 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX3O60493 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX3O60493 AC007620.3-201ENST00000608131 497 ntBASIC5.22□□□□□ -1.57
SNX3O60493 CXADRP3-202ENST00000617265 1100 ntBASIC5.22□□□□□ -1.57
SNX3O60493 AC007204.1-201ENST00000621794 555 ntBASIC5.22□□□□□ -1.57
SNX3O60493 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.22□□□□□ -1.57
SNX3O60493 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SNX3O60493 HSPD1P9-201ENST00000420325 1636 ntBASIC5.22□□□□□ -1.57
SNX3O60493 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX3O60493 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX3O60493 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.57
SNX3O60493 CASC19-238ENST00000641523 1558 ntBASIC5.21□□□□□ -1.57
SNX3O60493 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SNX3O60493 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.21□□□□□ -1.58
SNX3O60493 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX3O60493 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX3O60493 AC083843.3-201ENST00000623679 2186 ntBASIC5.21□□□□□ -1.58
SNX3O60493 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SNX3O60493 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SNX3O60493 AL133260.1-201ENST00000405720 405 ntBASIC5.21□□□□□ -1.58
SNX3O60493 RNA5SP487-201ENST00000410186 122 ntBASIC5.21□□□□□ -1.58
SNX3O60493 RN7SKP146-201ENST00000410242 334 ntBASIC5.21□□□□□ -1.58
SNX3O60493 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX3O60493 AK4P4-201ENST00000419465 646 ntBASIC5.21□□□□□ -1.58
SNX3O60493 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX3O60493 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX3O60493 AL445528.1-201ENST00000426330 420 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms