Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.81□□□□□ -1.48
MSI1O43347 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
MSI1O43347 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MSI1O43347 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MSI1O43347 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.81□□□□□ -1.48
MSI1O43347 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.81□□□□□ -1.48
MSI1O43347 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MSI1O43347 HSPA8P19-201ENST00000505359 1517 ntBASIC5.81□□□□□ -1.48
MSI1O43347 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MSI1O43347 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MSI1O43347 RNU6-697P-201ENST00000363348 107 ntBASIC5.81□□□□□ -1.48
MSI1O43347 RNA5SP234-201ENST00000363916 119 ntBASIC5.81□□□□□ -1.48
MSI1O43347 RN7SKP28-201ENST00000364770 305 ntBASIC5.81□□□□□ -1.48
MSI1O43347 SNORD51.1-201ENST00000365405 77 ntBASIC5.81□□□□□ -1.48
MSI1O43347 RNU6-925P-201ENST00000384629 104 ntBASIC5.81□□□□□ -1.48
MSI1O43347 RSL24D1P1-201ENST00000404972 493 ntBASIC5.81□□□□□ -1.48
MSI1O43347 GAPDHP42-201ENST00000406848 981 ntBASIC5.81□□□□□ -1.48
MSI1O43347 RN7SKP17-201ENST00000411242 351 ntBASIC5.81□□□□□ -1.48
MSI1O43347 RPSAP35-201ENST00000413753 818 ntBASIC5.81□□□□□ -1.48
MSI1O43347 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.81□□□□□ -1.48
MSI1O43347 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.81□□□□□ -1.48
MSI1O43347 RNGTTP1-201ENST00000420965 728 ntBASIC5.81□□□□□ -1.48
MSI1O43347 AL354766.1-201ENST00000423396 542 ntBASIC5.81□□□□□ -1.48
MSI1O43347 AL121776.1-201ENST00000429337 372 ntBASIC5.81□□□□□ -1.48
MSI1O43347 TMEM183AP1-205ENST00000432739 290 ntBASIC5.81□□□□□ -1.48
MSI1O43347 OR6D1P-201ENST00000436165 939 ntBASIC5.81□□□□□ -1.48
MSI1O43347 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.81□□□□□ -1.48
MSI1O43347 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.81□□□□□ -1.48
MSI1O43347 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.81□□□□□ -1.48
MSI1O43347 AC093719.1-201ENST00000480427 441 ntBASIC5.81□□□□□ -1.48
MSI1O43347 AC016687.1-201ENST00000482574 353 ntBASIC5.81□□□□□ -1.48
MSI1O43347 PDCL3P4-201ENST00000489621 720 ntBASIC5.81□□□□□ -1.48
MSI1O43347 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MSI1O43347 SCARNA21.2-201ENST00000516600 166 ntBASIC5.81□□□□□ -1.48
MSI1O43347 NRBF2P4-201ENST00000520874 850 ntBASIC5.81□□□□□ -1.48
MSI1O43347 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
MSI1O43347 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.81□□□□□ -1.48
MSI1O43347 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.81□□□□□ -1.48
MSI1O43347 OR1AB1P-201ENST00000585564 761 ntBASIC5.81□□□□□ -1.48
MSI1O43347 AC017076.1-201ENST00000607613 578 ntBASIC5.81□□□□□ -1.48
MSI1O43347 AC034229.4-201ENST00000607861 441 ntBASIC5.81□□□□□ -1.48
MSI1O43347 OR51C1P-201ENST00000608504 942 ntBASIC5.81□□□□□ -1.48
MSI1O43347 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.81□□□□□ -1.48
MSI1O43347 AL356608.1-201ENST00000610034 820 ntBASIC5.81□□□□□ -1.48
MSI1O43347 MIR6768-201ENST00000610734 72 ntBASIC5.81□□□□□ -1.48
MSI1O43347 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.81□□□□□ -1.48
MSI1O43347 AC104763.3-201ENST00000613765 618 ntBASIC5.81□□□□□ -1.48
MSI1O43347 AL118522.2-201ENST00000616045 615 ntBASIC5.81□□□□□ -1.48
MSI1O43347 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MSI1O43347 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.81□□□□□ -1.48
MSI1O43347 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.81□□□□□ -1.48
MSI1O43347 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
MSI1O43347 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
MSI1O43347 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
MSI1O43347 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
MSI1O43347 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MSI1O43347 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MSI1O43347 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
MSI1O43347 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MSI1O43347 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
MSI1O43347 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.81□□□□□ -1.48
MSI1O43347 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
MSI1O43347 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MSI1O43347 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
MSI1O43347 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.8□□□□□ -1.48
MSI1O43347 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
MSI1O43347 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
MSI1O43347 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.8□□□□□ -1.48
MSI1O43347 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MSI1O43347 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
MSI1O43347 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MSI1O43347 RNU6-316P-201ENST00000391027 107 ntBASIC5.8□□□□□ -1.48
MSI1O43347 TRIM60P17-201ENST00000415181 719 ntBASIC5.8□□□□□ -1.48
MSI1O43347 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MSI1O43347 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.8□□□□□ -1.48
MSI1O43347 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.8□□□□□ -1.48
MSI1O43347 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.8□□□□□ -1.48
MSI1O43347 RN7SL583P-201ENST00000475692 287 ntBASIC5.8□□□□□ -1.48
MSI1O43347 RN7SL184P-201ENST00000488308 297 ntBASIC5.8□□□□□ -1.48
MSI1O43347 AC090543.1-201ENST00000492168 485 ntBASIC5.8□□□□□ -1.48
MSI1O43347 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.8□□□□□ -1.48
MSI1O43347 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.8□□□□□ -1.48
MSI1O43347 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.8□□□□□ -1.48
MSI1O43347 RPL7L1P4-201ENST00000513004 707 ntBASIC5.8□□□□□ -1.48
MSI1O43347 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
MSI1O43347 AC136777.2-201ENST00000522979 358 ntBASIC5.8□□□□□ -1.48
MSI1O43347 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.8□□□□□ -1.48
MSI1O43347 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.8□□□□□ -1.48
MSI1O43347 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.8□□□□□ -1.48
MSI1O43347 AC012616.1-201ENST00000600294 197 ntBASIC5.8□□□□□ -1.48
MSI1O43347 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.8□□□□□ -1.48
MSI1O43347 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.8□□□□□ -1.48
MSI1O43347 KATNBL1P5-201ENST00000605015 517 ntBASIC5.8□□□□□ -1.48
MSI1O43347 AC135178.6-201ENST00000605314 398 ntBASIC5.8□□□□□ -1.48
MSI1O43347 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.8□□□□□ -1.48
MSI1O43347 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.8□□□□□ -1.48
MSI1O43347 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.8□□□□□ -1.48
MSI1O43347 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.8□□□□□ -1.48
MSI1O43347 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
MSI1O43347 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms