Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM38O00635 UGT2B26P-201ENST00000508672 1613 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TRIM38O00635 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM38O00635 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM38O00635 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM38O00635 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
TRIM38O00635 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
TRIM38O00635 AC007618.1-201ENST00000366455 732 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 U3.25-201ENST00000391209 220 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM38O00635 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 GAPDHP15-201ENST00000398586 975 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 MTATP6P31-201ENST00000406985 692 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 RN7SKP286-201ENST00000410894 299 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 NIFKP3-201ENST00000417799 865 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AL354692.1-201ENST00000423044 315 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 RPL23AP4-201ENST00000427757 463 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM38O00635 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM38O00635 AC064862.4-201ENST00000442180 334 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM38O00635 AP000281.1-201ENST00000444036 316 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AL445466.1-201ENST00000448432 357 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AL445665.1-202ENST00000452436 324 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TRIM38O00635 AC107015.1-201ENST00000466902 747 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM38O00635 SETP6-201ENST00000479329 568 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 UBE2V1P12-201ENST00000503954 474 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM38O00635 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 RNU6-334P-201ENST00000517072 102 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM38O00635 AC136777.2-201ENST00000522979 358 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 WBP1LP3-201ENST00000523033 208 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 SOX5P1-201ENST00000524155 1127 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AC090022.1-201ENST00000546569 311 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM38O00635 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM38O00635 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM38O00635 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM38O00635 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM38O00635 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM38O00635 MIR4776-2-201ENST00000580204 80 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM38O00635 AC040904.1-201ENST00000590850 223 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AC005034.4-201ENST00000603612 899 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AC119501.1-201ENST00000603646 475 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 RNA5SP440-201ENST00000612665 119 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TRIM38O00635 AC004477.3-201ENST00000614061 590 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AC015660.5-201ENST00000623238 564 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 AL357562.1-201ENST00000624911 609 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 AL049767.1-202ENST00000637826 242 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM38O00635 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM38O00635 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TRIM38O00635 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM38O00635 GTF2IP4-201ENST00000453092 2054 ntBASIC5.95□□□□□ -1.46
TRIM38O00635 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
TRIM38O00635 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM38O00635 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TRIM38O00635 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM38O00635 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM38O00635 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TRIM38O00635 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM38O00635 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM38O00635 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM38O00635 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM38O00635 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM38O00635 AC106872.5-201ENST00000508856 1416 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM38O00635 OR4K17-201ENST00000315543 1032 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TRIM38O00635 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM38O00635 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 AL355143.1-201ENST00000407101 841 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 RNU2-17P-201ENST00000410290 190 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM38O00635 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM38O00635 AL158050.1-201ENST00000416077 457 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 AL158827.1-201ENST00000416300 391 ntBASIC5.94□□□□□ -1.46
TRIM38O00635 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms