Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXN3O00409 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXN3O00409 RPL5P10-201ENST00000445207 894 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXN3O00409 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXN3O00409 TVP23BP2-201ENST00000455082 615 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 SNRPCP3-201ENST00000474888 476 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 RPS7P6-201ENST00000485777 579 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXN3O00409 RPL37P23-201ENST00000492641 294 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXN3O00409 CDH12P2-201ENST00000504393 298 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.16□□□□□ -1.42
FOXN3O00409 AC024405.1-201ENST00000532521 1042 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
FOXN3O00409 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXN3O00409 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXN3O00409 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.16□□□□□ -1.42
FOXN3O00409 NANOGP3-201ENST00000605855 286 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 AC025175.1-201ENST00000606482 759 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 MIR7109-201ENST00000613748 65 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
FOXN3O00409 RPL23AP61-201ENST00000623642 466 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 AC073593.1-201ENST00000624500 411 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 TMEM30CP-203ENST00000637814 1035 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
FOXN3O00409 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
FOXN3O00409 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXN3O00409 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXN3O00409 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXN3O00409 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXN3O00409 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXN3O00409 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
FOXN3O00409 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
FOXN3O00409 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXN3O00409 AC087516.1-201ENST00000561236 2428 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXN3O00409 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
FOXN3O00409 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
FOXN3O00409 AL159987.1-201ENST00000347911 293 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
FOXN3O00409 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXN3O00409 MT-TP-201ENST00000387461 68 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 ATP5HP3-201ENST00000396994 486 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 MIR1203-201ENST00000408812 85 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 RNU2-17P-201ENST00000410290 190 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 RNU2-18P-201ENST00000411224 162 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXN3O00409 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXN3O00409 RNGTTP1-201ENST00000420965 728 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXN3O00409 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
FOXN3O00409 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXN3O00409 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXN3O00409 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
FOXN3O00409 RPS23P9-201ENST00000448848 438 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXN3O00409 RN7SL168P-201ENST00000463821 279 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 AC018635.1-201ENST00000468292 1030 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 AP002884.1-201ENST00000479691 655 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 AC107398.1-201ENST00000486904 505 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 RN7SL170P-201ENST00000487098 295 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 RN7SL284P-201ENST00000498823 275 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXN3O00409 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXN3O00409 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXN3O00409 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXN3O00409 GAPDHP62-201ENST00000515313 990 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 SCARNA1-201ENST00000517138 166 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 IGKV2-19-201ENST00000518132 283 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 HMGN2P36-201ENST00000529541 409 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 AP000648.1-201ENST00000529682 397 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXN3O00409 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXN3O00409 YWHAZP1-201ENST00000556286 722 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXN3O00409 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXN3O00409 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXN3O00409 ZNF322P1-201ENST00000568013 1209 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXN3O00409 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXN3O00409 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXN3O00409 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.15□□□□□ -1.42
FOXN3O00409 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.15□□□□□ -1.42
FOXN3O00409 AL031601.1-201ENST00000605702 394 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 AC012557.1-201ENST00000607115 611 ntBASIC6.15□□□□□ -1.42
FOXN3O00409 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.15□□□□□ -1.42
FOXN3O00409 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
FOXN3O00409 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms