Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC092754.1-201ENST00000472975 479 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 AC093827.1-201ENST00000480094 861 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 AC022133.1-201ENST00000490961 571 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 RPS12P31-201ENST00000491419 398 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 ATG10-AS1-201ENST00000504846 648 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 IMPA1P1-201ENST00000510718 842 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.22□□□□□ -1.57
SLC28A1O00337 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC28A1O00337 FTH1P11-201ENST00000517577 551 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 AC138832.1-201ENST00000522871 556 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
SLC28A1O00337 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC28A1O00337 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC28A1O00337 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC28A1O00337 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC28A1O00337 AC027281.1-201ENST00000574178 758 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 AL138895.2-201ENST00000603019 178 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC28A1O00337 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC28A1O00337 AC091932.2-201ENST00000623014 291 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 AC015660.5-201ENST00000623238 564 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 FRG1EP-201ENST00000634469 770 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 AC099654.6-201ENST00000636487 512 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 MIR193BHG-214ENST00000641765 509 ntBASIC5.22□□□□□ -1.57
SLC28A1O00337 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC28A1O00337 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SLC28A1O00337 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC28A1O00337 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SLC28A1O00337 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC28A1O00337 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC28A1O00337 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
SLC28A1O00337 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SLC28A1O00337 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SLC28A1O00337 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
SLC28A1O00337 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC28A1O00337 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC28A1O00337 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SLC28A1O00337 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC28A1O00337 AC023490.2-201ENST00000359859 470 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 RN7SKP187-201ENST00000365536 330 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 DBIP1-201ENST00000401435 260 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 OR2AT2P-201ENST00000413438 905 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC28A1O00337 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC28A1O00337 AJ239321.1-201ENST00000424255 564 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 AL662874.1-201ENST00000426065 230 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 MAPRE1P3-201ENST00000435438 796 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.21□□□□□ -1.58
SLC28A1O00337 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC28A1O00337 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.21□□□□□ -1.58
SLC28A1O00337 AC109481.1-201ENST00000509173 282 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 ASNSP4-201ENST00000511103 447 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
SLC28A1O00337 AC117525.1-201ENST00000515228 503 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 CYCSP22-201ENST00000517555 339 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 NRBF2P4-201ENST00000520874 850 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC28A1O00337 TOMM20P1-201ENST00000534518 427 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC28A1O00337 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC28A1O00337 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC28A1O00337 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC28A1O00337 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC28A1O00337 MIR4271-201ENST00000582451 67 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC28A1O00337 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC28A1O00337 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC28A1O00337 AC012616.1-201ENST00000600294 197 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC28A1O00337 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.21□□□□□ -1.58
SLC28A1O00337 AC009027.1-201ENST00000604510 479 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 MIR6780B-201ENST00000610307 79 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 AC015922.4-201ENST00000612568 690 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 AP005431.1-201ENST00000618479 319 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 AP003400.3-201ENST00000624904 346 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC28A1O00337 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC28A1O00337 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
SLC28A1O00337 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC28A1O00337 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC28A1O00337 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC28A1O00337 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SLC28A1O00337 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SLC28A1O00337 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC28A1O00337 AC068870.3-201ENST00000625077 2536 ntBASIC5.21□□□□□ -1.58
SLC28A1O00337 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC28A1O00337 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC28A1O00337 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC28A1O00337 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
SLC28A1O00337 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC28A1O00337 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC28A1O00337 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC28A1O00337 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SLC28A1O00337 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SLC28A1O00337 AL358178.1-201ENST00000407698 397 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 RPL34P3-201ENST00000421454 338 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.2□□□□□ -1.58
SLC28A1O00337 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC28A1O00337 Z84478.1-201ENST00000438230 1219 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms