Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 OR2M1P-201ENST00000318104 951 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 Y_RNA.9-201ENST00000362354 101 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 Y_RNA.61-201ENST00000362835 102 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 RNU6-839P-201ENST00000363347 108 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 RNA5SP333-201ENST00000363466 118 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 RNU4-76P-201ENST00000364509 141 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 RNA5SP334-201ENST00000364825 118 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 RNU6-619P-201ENST00000365146 108 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 RNU6-1011P-201ENST00000384668 107 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 RNU6-1300P-201ENST00000391046 108 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 MIR1284-201ENST00000408337 120 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC138393.2-201ENST00000414742 246 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 OR51A5P-201ENST00000415429 942 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC092647.1-201ENST00000420654 287 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC009237.2-201ENST00000421358 284 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AL389915.1-201ENST00000422463 466 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC239367.2-201ENST00000447309 705 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 COX6CP18-201ENST00000448769 222 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 RPSAP7-201ENST00000456871 885 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AMD1P1-201ENST00000457220 922 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 RPL7P38-201ENST00000488396 739 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 IGLV10-67-201ENST00000519446 325 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC087276.1-201ENST00000529659 480 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC092375.1-201ENST00000550410 637 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 MRPL45P2-203ENST00000573318 473 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 MIR3689C-201ENST00000581239 72 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AL137190.1-201ENST00000603288 282 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC108451.2-201ENST00000603875 538 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 RN7SL760P-201ENST00000607344 270 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AC091834.1-201ENST00000614543 472 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 AL355377.1-201ENST00000621125 1653 ntBASIC6.09□□□□□ -1.43
SHISA3A0PJX4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SHISA3A0PJX4 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.09□□□□□ -1.44
SHISA3A0PJX4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SHISA3A0PJX4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SHISA3A0PJX4 WASF5P-205ENST00000428639 1455 ntBASIC6.09□□□□□ -1.44
SHISA3A0PJX4 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SHISA3A0PJX4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SHISA3A0PJX4 TMEM75-201ENST00000624314 2165 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 RNU6-1017P-201ENST00000363613 106 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 RNU4-7P-201ENST00000364758 141 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 RNU6-98P-201ENST00000384173 107 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms