Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SNORA48.4-201ENST00000391089 134 ntBASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 CYCSP12-201ENST00000437729 300 ntBASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RPS4XP1-201ENST00000482189 787 ntBASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 IMMP1LP3-201ENST00000604197 224 ntBASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL118522.2-201ENST00000616045 615 ntBASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC026367.3-201ENST00000619032 590 ntBASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
TCRBV4S1A1TA0A5B7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RNA5SP234-201ENST00000363916 119 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RPSAP35-201ENST00000413753 818 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 SLC35E1P1-201ENST00000419313 864 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RPL7AP49-201ENST00000429522 581 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 FAM96AP1-201ENST00000430879 482 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL591438.1-201ENST00000433508 581 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 OR6D1P-201ENST00000436165 939 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC016772.1-201ENST00000444170 1261 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 OR52E3P-201ENST00000452083 936 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RN7SL799P-201ENST00000475891 298 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL049874.2-201ENST00000492636 288 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RN7SL447P-201ENST00000494711 245 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 HIGD1AP14-201ENST00000507617 282 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RNA5SP92-201ENST00000516437 110 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 SCARNA16.4-201ENST00000516956 187 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC078878.1-201ENST00000539832 958 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC025574.2-201ENST00000615621 514 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL078621.3-201ENST00000623707 2042 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL162456.1-201ENST00000634535 2006 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC008079.2-201ENST00000623543 20396 ntBASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RNU6-171P-201ENST00000384354 107 ntBASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 SPTLC1P2-201ENST00000407089 121 ntBASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC007161.1-204ENST00000423039 460 ntBASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 RPS11P7-201ENST00000442125 465 ntBASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC105399.1-202ENST00000447303 205 ntBASIC4.31□□□□□ -1.72
TCRBV4S1A1TA0A5B7 AC011225.1-201ENST00000457751 369 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms