Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 MTCO2P31-201ENST00000402702 684 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AL121835.1-201ENST00000404250 354 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 MTND4LP17-201ENST00000414607 293 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC015977.1-201ENST00000418887 292 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 USP9YP21-201ENST00000420603 432 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC000041.1-201ENST00000439655 175 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC015983.1-201ENST00000441577 373 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC239798.3-201ENST00000454459 408 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 RN7SL352P-201ENST00000466002 277 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 RPL6P9-201ENST00000466502 859 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 RPL34P33-201ENST00000486062 334 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AL035690.1-201ENST00000490892 383 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 RPL21P131-201ENST00000497298 483 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC112673.1-201ENST00000513168 575 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 PRMT5P1-201ENST00000514351 598 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 SNORA31.13-201ENST00000516624 135 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC027308.1-201ENST00000517993 110 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC013701.1-201ENST00000522657 465 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 LRRC6P1-201ENST00000532188 885 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 DUX4L52-201ENST00000549363 777 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC004890.3-201ENST00000605566 1095 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC079395.3-201ENST00000615161 484 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AL512652.1-201ENST00000619006 500 ntBASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PCDHB1Q9Y5F3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.09□□□□□ -1.44
PCDHB1Q9Y5F3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PCDHB1Q9Y5F3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.09□□□□□ -1.44
PCDHB1Q9Y5F3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PCDHB1Q9Y5F3 NXF4-202ENST00000416098 1465 ntBASIC6.09□□□□□ -1.44
PCDHB1Q9Y5F3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PCDHB1Q9Y5F3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.09□□□□□ -1.44
PCDHB1Q9Y5F3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 AC099786.3-201ENST00000565735 1410 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 AL591135.1-201ENST00000401578 5914 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 MIR323A-201ENST00000362199 86 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 RNU6-236P-201ENST00000363886 106 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 U6.112-201ENST00000384129 70 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 RNY3P9-201ENST00000384727 106 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 RPL7P27-201ENST00000403775 720 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 RPS7P8-201ENST00000418311 581 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 MTCO2P21-201ENST00000419780 677 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 ETF1P3-201ENST00000430422 1160 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 AC093716.1-201ENST00000435923 377 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 NANOGP9-201ENST00000439890 892 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 OR10R1P-201ENST00000441524 1141 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 AL161636.2-201ENST00000445179 927 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 AL445687.2-201ENST00000458156 728 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 RPS4XP6-201ENST00000477670 797 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 AC107398.1-201ENST00000486904 505 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 RPS4XP14-201ENST00000493072 781 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 AC008945.1-201ENST00000505144 499 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 HPRT1P1-201ENST00000509498 657 ntBASIC6.08□□□□□ -1.44
PCDHB1Q9Y5F3 BTG4P1-201ENST00000510421 183 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms