Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AP003400.6-201ENST00000624698 740 ntBASIC5.66□□□□□ -1.5
YIPF1Q9Y548 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YIPF1Q9Y548 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YIPF1Q9Y548 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
YIPF1Q9Y548 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
YIPF1Q9Y548 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
YIPF1Q9Y548 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
YIPF1Q9Y548 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
YIPF1Q9Y548 AC073429.2-201ENST00000569694 1444 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AL513548.1-201ENST00000562904 1724 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 RNU6-386P-201ENST00000362650 107 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 Y_RNA.62-201ENST00000362840 99 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 SNORA17.1-201ENST00000362945 126 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 MIR105-1-201ENST00000385222 81 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 MT-RNR1-201ENST00000389680 954 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AL607077.1-201ENST00000401718 499 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 RPL7P58-201ENST00000402913 758 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 U3.36-201ENST00000408418 213 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 RN7SKP125-201ENST00000410481 302 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC114878.1-201ENST00000441166 358 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 CEACAMP7-201ENST00000444105 496 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC073072.2-201ENST00000447425 348 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC104634.1-201ENST00000452720 462 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 RN7SL188P-201ENST00000469842 285 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC093827.1-201ENST00000480094 861 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 RNA5SP373-201ENST00000517271 95 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 YWHABP2-201ENST00000540201 713 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 AC020915.5-201ENST00000596836 964 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 HPVC1-201ENST00000629899 1198 ntBASIC5.65□□□□□ -1.5
YIPF1Q9Y548 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
YIPF1Q9Y548 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
YIPF1Q9Y548 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
YIPF1Q9Y548 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
YIPF1Q9Y548 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
YIPF1Q9Y548 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
YIPF1Q9Y548 AL360270.2-201ENST00000562952 5985 ntBASIC5.65□□□□□ -1.51
YIPF1Q9Y548 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
YIPF1Q9Y548 AC114947.2-201ENST00000565748 2125 ntBASIC5.65□□□□□ -1.51
YIPF1Q9Y548 CCAT2-201ENST00000630920 1752 ntBASIC5.65□□□□□ -1.51
YIPF1Q9Y548 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 RNU6-819P-201ENST00000364116 107 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 DBIP1-201ENST00000401435 260 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AL645733.1-201ENST00000402250 217 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 RN7SKP126-201ENST00000411143 300 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AC073850.1-201ENST00000449243 255 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AC109462.1-201ENST00000491087 368 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 RPS4XP20-201ENST00000505751 772 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AC024940.3-201ENST00000538551 316 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 RN7SL356P-201ENST00000582228 248 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AP001267.4-201ENST00000602598 545 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AC095055.1-201ENST00000603472 1113 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 AC020923.1-201ENST00000624021 917 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 LINC01739-205ENST00000641890 573 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
YIPF1Q9Y548 KYNUP3-201ENST00000574386 1341 ntBASIC5.64□□□□□ -1.51
YIPF1Q9Y548 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms