Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RPS12P31-201ENST00000491419 398 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 MIR7853-201ENST00000584820 132 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 RN7SKP113-201ENST00000363891 295 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 SNORA2.3-201ENST00000383920 135 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 AL356967.1-201ENST00000406305 431 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 AC016712.1-201ENST00000431088 378 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 AL049745.1-201ENST00000433953 286 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 RPL36AP15-201ENST00000444514 266 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 AC023271.1-201ENST00000445936 1090 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 AC000111.2-201ENST00000448200 210 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 AL356981.1-201ENST00000454879 684 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 AC019322.1-201ENST00000571869 389 ntBASIC6.62□□□□□ -1.35
SCN11AQ9UI33 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SCN11AQ9UI33 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 AL033543.1-201ENST00000623440 13454 ntBASIC6.61□□□□□ -1.35
SCN11AQ9UI33 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 CHEK2P3-201ENST00000416118 248 ntBASIC6.61□□□□□ -1.35
SCN11AQ9UI33 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 AL138878.2-201ENST00000440581 1241 ntBASIC6.61□□□□□ -1.35
SCN11AQ9UI33 AL513533.1-201ENST00000453728 415 ntBASIC6.61□□□□□ -1.35
SCN11AQ9UI33 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 RN7SL441P-201ENST00000492388 296 ntBASIC6.61□□□□□ -1.35
SCN11AQ9UI33 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 AC025857.2-201ENST00000602711 238 ntBASIC6.61□□□□□ -1.35
SCN11AQ9UI33 AC007786.3-201ENST00000615154 596 ntBASIC6.61□□□□□ -1.35
SCN11AQ9UI33 uc_338.7-201ENST00000621834 124 ntBASIC6.61□□□□□ -1.35
SCN11AQ9UI33 AC000095.2-202ENST00000637415 154 ntBASIC6.61□□□□□ -1.35
SCN11AQ9UI33 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
SCN11AQ9UI33 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 AC018765.1-201ENST00000623357 3446 ntBASIC6.6□□□□□ -1.35
SCN11AQ9UI33 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 NDUFB4P8-201ENST00000435351 367 ntBASIC6.6□□□□□ -1.35
SCN11AQ9UI33 AL137845.2-201ENST00000444292 988 ntBASIC6.6□□□□□ -1.35
SCN11AQ9UI33 RN7SL817P-201ENST00000480777 288 ntBASIC6.6□□□□□ -1.35
SCN11AQ9UI33 MRPS33P2-201ENST00000507850 322 ntBASIC6.6□□□□□ -1.35
SCN11AQ9UI33 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 RAB9BP1-201ENST00000519581 626 ntBASIC6.6□□□□□ -1.35
SCN11AQ9UI33 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 AL356317.1-201ENST00000396110 1436 ntBASIC6.6□□□□□ -1.35
SCN11AQ9UI33 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SCN11AQ9UI33 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 MIR192-201ENST00000384915 110 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.59□□□□□ -1.35
SCN11AQ9UI33 TCEA1P1-201ENST00000449716 880 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 IGHV5-78-201ENST00000450948 295 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 RN7SL443P-201ENST00000464331 290 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 AC063943.1-201ENST00000465434 453 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 AC091153.1-201ENST00000466297 402 ntBASIC6.59□□□□□ -1.35
SCN11AQ9UI33 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms