Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 OR4K12P-201ENST00000406538 961 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 OR6E1P-201ENST00000414424 923 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AC104333.2-201ENST00000422630 192 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 SUMO2P3-201ENST00000438311 288 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 GAPDHP58-201ENST00000438477 1006 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 CYCSP24-201ENST00000445119 316 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 GAPDHP25-201ENST00000447061 1001 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AC109481.1-201ENST00000509173 282 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 RN7SKP99-201ENST00000517028 307 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AP006245.2-201ENST00000522004 300 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AL049872.1-201ENST00000556323 322 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 RN7SL708P-201ENST00000580952 299 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AP005262.1-201ENST00000582646 997 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AC079315.1-201ENST00000602952 623 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AC009597.2-201ENST00000604659 592 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 AL596275.2-207ENST00000641188 675 ntBASIC4.98□□□□□ -1.61
VAPAQ9P0L0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VAPAQ9P0L0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC008079.2-201ENST00000623543 20396 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 SOCS5P3-201ENST00000425115 1576 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 RNA5SP46-201ENST00000362370 120 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 RNA5SP223-201ENST00000365174 120 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AL133388.1-201ENST00000404509 287 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 CTSL3P-202ENST00000412179 788 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 Z93019.1-201ENST00000416450 973 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 BMS1P17-202ENST00000416720 316 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 HSPE1P16-201ENST00000426640 348 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 CLUHP1-201ENST00000435012 1190 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 DNAJA1P5-201ENST00000440278 943 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC012512.1-201ENST00000446594 718 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC005165.2-201ENST00000466070 380 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 RN7SL170P-201ENST00000487098 295 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 USP9YP2-201ENST00000504503 1000 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC138866.2-201ENST00000508650 584 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 USP9YP1-201ENST00000513521 1002 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 YWHABP2-201ENST00000540201 713 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 DPRXP4-201ENST00000578053 568 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC008814.1-201ENST00000603797 406 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC005252.1-201ENST00000604518 1063 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC010809.3-201ENST00000621310 641 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 CU639417.4-201ENST00000623928 207 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 AC103703.1-201ENST00000634783 663 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 OR13C1P-202ENST00000641378 2919 ntBASIC4.97□□□□□ -1.61
VAPAQ9P0L0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.97□□□□□ -1.61
VAPAQ9P0L0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VAPAQ9P0L0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
VAPAQ9P0L0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VAPAQ9P0L0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VAPAQ9P0L0 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VAPAQ9P0L0 MIR133B-201ENST00000362210 119 ntBASIC4.96□□□□□ -1.62
VAPAQ9P0L0 SETP15-201ENST00000412724 337 ntBASIC4.96□□□□□ -1.62
VAPAQ9P0L0 RPL34P3-201ENST00000421454 338 ntBASIC4.96□□□□□ -1.62
VAPAQ9P0L0 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.96□□□□□ -1.62
VAPAQ9P0L0 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.96□□□□□ -1.62
VAPAQ9P0L0 AC104634.1-201ENST00000452720 462 ntBASIC4.96□□□□□ -1.62
VAPAQ9P0L0 RN7SL189P-201ENST00000468631 289 ntBASIC4.96□□□□□ -1.62
VAPAQ9P0L0 RPL37P23-201ENST00000492641 294 ntBASIC4.96□□□□□ -1.62
VAPAQ9P0L0 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.96□□□□□ -1.62
VAPAQ9P0L0 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VAPAQ9P0L0 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms