Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC010487.1-201ENST00000594408 1172 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 AC132825.8-201ENST00000640783 297 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 ADAM5-202ENST00000399789 1942 ntBASIC5.27□□□□□ -1.57
TREX1Q9NSU2 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.27□□□□□ -1.57
TREX1Q9NSU2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.26□□□□□ -1.57
TREX1Q9NSU2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 RNU1-74P-201ENST00000384108 171 ntBASIC5.26□□□□□ -1.57
TREX1Q9NSU2 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 GAPDHP58-201ENST00000438477 1006 ntBASIC5.26□□□□□ -1.57
TREX1Q9NSU2 BX842559.2-201ENST00000451418 605 ntBASIC5.26□□□□□ -1.57
TREX1Q9NSU2 AL133445.1-201ENST00000467051 452 ntBASIC5.26□□□□□ -1.57
TREX1Q9NSU2 RPSAP39-201ENST00000467439 883 ntBASIC5.26□□□□□ -1.57
TREX1Q9NSU2 RPL7P40-201ENST00000481703 745 ntBASIC5.26□□□□□ -1.57
TREX1Q9NSU2 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 AC100784.1-201ENST00000522790 310 ntBASIC5.26□□□□□ -1.57
TREX1Q9NSU2 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 AC019322.1-201ENST00000571869 389 ntBASIC5.26□□□□□ -1.57
TREX1Q9NSU2 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 AL512356.3-201ENST00000623005 461 ntBASIC5.26□□□□□ -1.57
TREX1Q9NSU2 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TREX1Q9NSU2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AC011755.1-201ENST00000623763 2049 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 KARSP1-201ENST00000451871 1752 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AP000473.2-201ENST00000602659 1537 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 OR56A4-201ENST00000330728 1209 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 RNA5SP183-201ENST00000362452 119 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 RNA5SP132-201ENST00000364725 118 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AC002524.1-201ENST00000411687 547 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AL133325.1-201ENST00000421090 382 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 CYCSP6-201ENST00000434498 302 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AC021660.1-201ENST00000465006 554 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 RN7SL189P-201ENST00000468631 289 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AP005131.7-201ENST00000610087 611 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AC004477.3-201ENST00000614061 590 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AC026124.2-201ENST00000621847 656 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 MAPK10-328ENST00000641553 4009 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 AC004158.1-201ENST00000564508 4319 ntBASIC5.25□□□□□ -1.57
TREX1Q9NSU2 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TREX1Q9NSU2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC093849.1-201ENST00000563631 2209 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 AC092747.4-201ENST00000620519 1861 ntBASIC5.24□□□□□ -1.57
TREX1Q9NSU2 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TREX1Q9NSU2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms