Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 OR9G4-201ENST00000302957 984 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 RNA5SP273-201ENST00000362484 113 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 RN7SKP224-201ENST00000364140 325 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 MIR1203-201ENST00000408812 85 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 RPL12P9-201ENST00000412942 488 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AC124944.2-201ENST00000429866 1242 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 ACA64.1-201ENST00000459171 127 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AC092754.1-201ENST00000472975 479 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 Y_RNA.667-201ENST00000516212 107 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 RNA5SP438-201ENST00000516561 112 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AP002981.1-201ENST00000517692 975 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 MRPS16P1-201ENST00000523462 412 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AC079905.1-201ENST00000549280 475 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 DUX4L52-201ENST00000549363 777 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 CD24P2-201ENST00000565486 219 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 MIR3154-201ENST00000577829 84 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AP005431.1-201ENST00000618479 319 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AC087565.3-203ENST00000641018 837 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CTNNBIP1Q9NSA3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AC091305.2-201ENST00000624049 1576 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 TMSB4XP2-201ENST00000335179 210 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 RNA5SP131-201ENST00000365452 119 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 GAPDHP42-201ENST00000406848 981 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 FAM183DP-201ENST00000421987 399 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AL450996.1-201ENST00000445574 1202 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 TIMM8BP2-201ENST00000445940 251 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AC068491.1-201ENST00000449539 1241 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AC044810.1-201ENST00000480271 711 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 OR5H7P-201ENST00000514084 930 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 RN7SKP34-201ENST00000516142 244 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 SNORA70.20-201ENST00000516848 126 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 CASP1P2-201ENST00000526830 1258 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AC107918.3-201ENST00000533272 382 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 BTG1P1-201ENST00000540396 508 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 IGBP1P1-201ENST00000554337 1009 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 CYCSP38-201ENST00000559840 322 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 SAMMSON-227ENST00000642114 1199 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 NEPNP-201ENST00000404786 1371 ntBASIC4.36□□□□□ -1.71
CTNNBIP1Q9NSA3 IFIT1P1-201ENST00000400497 1449 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms