Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC093297.3-201ENST00000607056 2517 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VTA1Q9NP79 RNU5B-4P-201ENST00000363508 111 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 SNORD8-201ENST00000363915 110 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 AL662874.1-201ENST00000426065 230 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 BRWD1P3-201ENST00000428816 390 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 AL035246.1-201ENST00000433554 1255 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 Z84478.1-201ENST00000438230 1219 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC079922.1-201ENST00000443291 359 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 MTND2P8-201ENST00000450555 1025 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 SNORD11.1-201ENST00000459482 85 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 GOLGA5P1-201ENST00000507317 980 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 PRELID3BP5-201ENST00000508612 460 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 ASNSP4-201ENST00000511103 447 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 RN7SKP141-201ENST00000516167 338 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 AP000916.1-201ENST00000533869 835 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC009712.1-201ENST00000564938 316 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC023825.1-201ENST00000566704 1030 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 TXNP4-201ENST00000575018 310 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 MTATP6P24-201ENST00000576835 677 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC067852.5-201ENST00000589299 310 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 AC063952.1-203ENST00000634410 658 ntBASIC6.65□□□□□ -1.34
VTA1Q9NP79 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.65□□□□□ -1.34
VTA1Q9NP79 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
VTA1Q9NP79 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.65□□□□□ -1.35
VTA1Q9NP79 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
VTA1Q9NP79 AC010329.1-201ENST00000593903 8328 ntBASIC6.65□□□□□ -1.35
VTA1Q9NP79 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
VTA1Q9NP79 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
VTA1Q9NP79 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.65□□□□□ -1.35
VTA1Q9NP79 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
VTA1Q9NP79 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
VTA1Q9NP79 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.65□□□□□ -1.35
VTA1Q9NP79 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VTA1Q9NP79 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VTA1Q9NP79 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VTA1Q9NP79 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC007342.7-201ENST00000624610 2337 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VTA1Q9NP79 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VTA1Q9NP79 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 RNU4-74P-201ENST00000411280 161 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC016769.2-201ENST00000414815 475 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 AL596448.1-201ENST00000415024 392 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 LIPT1P1-201ENST00000415870 1186 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC093084.1-201ENST00000424233 687 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 AK3P5-201ENST00000432033 519 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 DEFA9P-201ENST00000433042 285 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 HMGB3P24-201ENST00000433260 622 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 MTND1P33-201ENST00000446251 917 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 RPL7L1P3-201ENST00000455249 689 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC026348.1-201ENST00000462549 1053 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 PPP1R11P1-201ENST00000486095 376 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 OR7E157P-201ENST00000494376 911 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 EIF3LP3-201ENST00000495197 822 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC133963.2-201ENST00000513686 578 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 CYP4F27P-201ENST00000514557 494 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 RNU6-615P-201ENST00000516065 106 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 SNORA43.3-201ENST00000517240 103 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 IGKV2-19-201ENST00000518132 283 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 IGKV2-18-201ENST00000522607 343 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC007494.1-201ENST00000562293 760 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VTA1Q9NP79 MIR4260-201ENST00000583107 67 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC019131.2-201ENST00000609071 870 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC093673.2-201ENST00000609674 331 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms