Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC021749.1-201ENST00000604322 607 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC097467.4-201ENST00000605504 141 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AL031775.1-201ENST00000607014 887 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC139769.3-201ENST00000618383 175 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC005514.1-201ENST00000623521 208 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 SNX18P10-201ENST00000625014 519 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 ZNF663P-202ENST00000641770 1131 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC022905.1-201ENST00000503430 3048 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 PARP4P1-201ENST00000435945 2337 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 AC079298.1-201ENST00000625026 1619 ntBASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SEC61A2Q9H9S3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 DNM1P47-203ENST00000571780 12667 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC007382.1-201ENST00000624376 2618 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AL158152.1-201ENST00000602652 1435 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 RNA5SP321-201ENST00000362722 111 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 RNA5SP514-201ENST00000363717 111 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 RNU6-694P-201ENST00000364071 147 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC105402.1-201ENST00000413336 545 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AL161449.1-201ENST00000414531 1199 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AL049610.1-201ENST00000423374 372 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 CENPIP1-201ENST00000425713 902 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 DPPA2P1-201ENST00000428060 556 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 YWHAZP7-201ENST00000436906 631 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 MTCYBP34-201ENST00000439552 670 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 GTF2IP14-201ENST00000441415 586 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 WDR82P2-201ENST00000444540 928 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 CEACAMP11-201ENST00000455211 583 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 CST12P-201ENST00000457644 362 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC236972.4-201ENST00000458091 963 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC128716.1-201ENST00000475129 166 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 RPS4XP17-201ENST00000479057 754 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 H3F3AP3-201ENST00000497682 407 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC008565.1-201ENST00000509046 885 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 RN7SKP196-201ENST00000516267 345 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AP001804.1-201ENST00000526868 919 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 OR9G2P-201ENST00000533326 880 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AL162632.2-201ENST00000553933 399 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.84□□□□□ -1.47
SEC61A2Q9H9S3 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms