Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 OR7E116P-201ENST00000448529 957 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 HMGN1P8-201ENST00000463578 288 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 RN7SL51P-201ENST00000468230 285 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 RPS4XP1-201ENST00000482189 787 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 EIF1P7-201ENST00000487533 337 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 RN7SL30P-201ENST00000488416 306 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AC106806.2-201ENST00000509365 500 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AC074255.1-201ENST00000511259 501 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 MTATP6P9-201ENST00000515039 680 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AC244502.2-201ENST00000543361 851 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 CR383656.14-201ENST00000551951 406 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 HSPE1P2-201ENST00000554777 306 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AC007346.2-201ENST00000564816 892 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AC022387.2-201ENST00000604050 448 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 GMCL1P2-201ENST00000605230 823 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AC138907.10-201ENST00000623708 983 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 MAPK10-338ENST00000641647 3362 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 PABPC1P6-201ENST00000445594 1829 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AL137141.1-201ENST00000624622 4836 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 RN7SKP28-201ENST00000364770 305 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 RNA5SP30-201ENST00000365552 115 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC007618.1-201ENST00000366455 732 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 RPS6P23-201ENST00000413224 722 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AL158827.1-201ENST00000416300 391 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 NENFP1-201ENST00000419476 466 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 RPL17P35-201ENST00000432217 549 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 MTND2P40-201ENST00000436718 841 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 PTMAP6-201ENST00000439110 327 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 RN7SL610P-201ENST00000463845 291 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 RN7SL583P-201ENST00000475692 287 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 TRBV5-2-201ENST00000489095 273 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC090638.1-201ENST00000498296 909 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC006499.3-201ENST00000506077 748 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 TOMM22P4-201ENST00000511318 336 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 SNORA70.11-201ENST00000515987 138 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 SNORA70.13-201ENST00000516116 138 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 HNRNPRP2-201ENST00000528421 743 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC090424.1-201ENST00000535243 736 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC008536.1-201ENST00000602872 669 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 PPATP2-201ENST00000605635 508 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC097065.2-201ENST00000608159 533 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC008115.4-201ENST00000619780 775 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 MIR6837-201ENST00000620884 64 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC132068.1-201ENST00000623805 459 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AC139426.3-201ENST00000605648 2059 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 TET1P1-201ENST00000426627 2301 ntBASIC5.85□□□□□ -1.47
EBF3Q9H4W6 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
EBF3Q9H4W6 AL161756.3-201ENST00000641216 2071 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 AC140479.2-201ENST00000421567 3130 ntBASIC5.84□□□□□ -1.47
EBF3Q9H4W6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.84□□□□□ -1.47
EBF3Q9H4W6 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms