Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 RNU5B-1-201ENST00000363286 116 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 RNU1-49P-201ENST00000363468 159 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 OR7E156P-201ENST00000400303 464 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 NPM1P38-201ENST00000403835 865 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 SNORA77.2-201ENST00000408571 112 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 RPL26P37-201ENST00000411983 438 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 PNRC2P1-201ENST00000423940 420 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC004022.1-201ENST00000447766 1066 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC097359.1-201ENST00000447946 463 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 ZNF886P-201ENST00000450781 723 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 RPL12P31-201ENST00000478433 450 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 SNX18P24-201ENST00000505249 671 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 TPM3P3-201ENST00000521343 354 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC135983.3-201ENST00000528049 1226 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC063977.7-201ENST00000594454 337 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AL049844.2-201ENST00000604280 628 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 Z94722.1-201ENST00000604328 474 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 WBP1LP12-201ENST00000604449 331 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 MIR6862-1-201ENST00000613016 70 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 MIR6862-2-201ENST00000614755 70 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 HSPD1P7-201ENST00000447985 1686 ntBASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
AMBRA1Q9C0C7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC024587.1-201ENST00000505925 2157 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 PSMA6P1-201ENST00000400275 741 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AL356968.2-201ENST00000412769 1257 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 RPS26P13-201ENST00000419030 330 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 EIF4A1P1-201ENST00000420241 934 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 USP9YP11-201ENST00000427537 717 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 PPIAP10-201ENST00000438675 458 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC000041.1-201ENST00000439655 175 ntBASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.67□□□□□ -1.5
AMBRA1Q9C0C7 AL162739.1-201ENST00000450606 307 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms