Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 PRUNEP1-201ENST00000425846 705 ntBASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 AC239798.3-201ENST00000454459 408 ntBASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 AL035090.1-201ENST00000454835 332 ntBASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 RPL17P2-201ENST00000491913 451 ntBASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 RPEP1-201ENST00000504507 658 ntBASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 AC068339.2-201ENST00000534395 618 ntBASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 DUX4L52-201ENST00000549363 777 ntBASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 AL512310.9-201ENST00000553311 948 ntBASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 BLZF2P-201ENST00000553776 1130 ntBASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 AC126915.2-201ENST00000610957 190 ntBASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RTFDC1Q9BY42 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
RTFDC1Q9BY42 TCP1P3-201ENST00000414406 1498 ntBASIC6.9□□□□□ -1.31
RTFDC1Q9BY42 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RTFDC1Q9BY42 AL021877.2-201ENST00000624442 10684 ntBASIC6.9□□□□□ -1.31
RTFDC1Q9BY42 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RTFDC1Q9BY42 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.9□□□□□ -1.31
RTFDC1Q9BY42 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RTFDC1Q9BY42 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RTFDC1Q9BY42 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RTFDC1Q9BY42 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.9□□□□□ -1.31
RTFDC1Q9BY42 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 RPL23P2-201ENST00000320371 421 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 RNA5SP339-201ENST00000390987 122 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AL109941.1-201ENST00000401925 229 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 RPS26P13-201ENST00000419030 330 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AL133325.1-201ENST00000421090 382 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 MTND4LP13-201ENST00000425022 298 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 BX284632.1-201ENST00000478218 541 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 RN7SL97P-201ENST00000486780 299 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 CAB39P1-201ENST00000502277 460 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AC021146.7-201ENST00000509604 775 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AC090424.1-201ENST00000535243 736 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AC007346.2-201ENST00000564816 892 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AC087763.1-201ENST00000603391 286 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AL049539.1-201ENST00000611964 459 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AL049777.1-201ENST00000622740 518 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 AC092159.4-201ENST00000624944 550 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 BX284613.1-201ENST00000452221 1641 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 ZNF402P-201ENST00000404435 3100 ntBASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
RTFDC1Q9BY42 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 SPATA2P1-201ENST00000431223 2055 ntBASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 HSPD1P7-201ENST00000447985 1686 ntBASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RTFDC1Q9BY42 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms