Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AL353777.1-201ENST00000425552 326 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AL049734.2-201ENST00000441066 616 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 FO393419.1-201ENST00000443746 355 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 RPL22-207ENST00000484532 449 ntTSL 2 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 RPS4XP18-201ENST00000495480 763 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 HSD3BP4-201ENST00000511509 1120 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 AP005902.1-201ENST00000521358 186 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AP003072.2-201ENST00000527756 676 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AP005597.3-201ENST00000532369 799 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 RN7SL123P-201ENST00000577239 292 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 AL021808.1-201ENST00000604325 1117 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC113194.1-201ENST00000606037 500 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC004908.1-201ENST00000606572 541 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC097641.3-201ENST00000613523 464 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC048380.3-201ENST00000623145 796 ntBASIC7.4□□□□□ -1.22
USB1Q9BQ65 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 NRG3-204ENST00000404576 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
USB1Q9BQ65 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.4□□□□□ -1.22
USB1Q9BQ65 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
USB1Q9BQ65 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
USB1Q9BQ65 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
USB1Q9BQ65 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.4□□□□□ -1.23
USB1Q9BQ65 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
USB1Q9BQ65 AC026464.2-201ENST00000567834 2421 ntBASIC7.4□□□□□ -1.23
USB1Q9BQ65 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
USB1Q9BQ65 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
USB1Q9BQ65 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
USB1Q9BQ65 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.23
USB1Q9BQ65 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
USB1Q9BQ65 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
USB1Q9BQ65 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.4□□□□□ -1.23
USB1Q9BQ65 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
USB1Q9BQ65 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL137145.2-201ENST00000399868 3086 ntTSL 2 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AP005230.1-205ENST00000639316 2015 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC007485.2-201ENST00000623493 1667 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 ASNSP1-204ENST00000641977 1664 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AHCYP5-201ENST00000331585 1238 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 IGKV7-3-201ENST00000357453 298 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 RNU6-169P-201ENST00000365336 107 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USB1Q9BQ65 SNORD86-201ENST00000391196 86 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 SNORA57.2-201ENST00000391265 128 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC234778.1-201ENST00000399253 370 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL354890.1-201ENST00000413730 346 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 RPL23AP30-201ENST00000432419 501 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC007683.1-201ENST00000432746 591 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 ERLEC1P1-201ENST00000433806 578 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 RPS3AP38-201ENST00000435889 763 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 TBL1YP1-201ENST00000440297 1026 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.39□□□□□ -1.23
USB1Q9BQ65 RPS4XP10-201ENST00000465034 731 ntBASIC7.39□□□□□ -1.23
USB1Q9BQ65 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms