Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC145207.9-201ENST00000623802 325 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX3Q99909 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSX3Q99909 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX3Q99909 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX3Q99909 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSX3Q99909 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX3Q99909 AC112198.2-201ENST00000426589 6996 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSX3Q99909 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX3Q99909 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX3Q99909 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 RNFT1P3-201ENST00000340898 1052 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 RN7SKP128-201ENST00000364270 303 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 U3.10-201ENST00000364459 214 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 SNORA68.2-201ENST00000391263 128 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SSX3Q99909 RN7SKP97-201ENST00000410966 333 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 NENFP1-201ENST00000419476 466 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 RPS15AP30-201ENST00000420976 390 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AL590623.1-201ENST00000427864 105 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AL389925.1-201ENST00000432257 728 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 RPS3AP38-201ENST00000435889 763 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 MTND2P40-201ENST00000436718 841 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 TUBB4BP6-201ENST00000437576 479 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AL450263.2-201ENST00000439400 589 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX3Q99909 AC099063.2-201ENST00000446360 662 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AL513343.1-201ENST00000451818 792 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX3Q99909 HLA-DPA3-207ENST00000454398 229 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 LDHBP2-201ENST00000456969 1005 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX3Q99909 EIF2S2P4-201ENST00000461070 984 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AP000942.1-201ENST00000463969 747 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 RN7SL352P-201ENST00000466002 277 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 AC020779.1-201ENST00000478757 796 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 OR52A4P-202ENST00000481634 799 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 COX6B1P2-201ENST00000489624 230 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX3Q99909 AC098799.1-201ENST00000504752 800 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX3Q99909 AC006499.4-201ENST00000510947 694 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 RNU6-760P-201ENST00000516078 97 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AC060775.1-201ENST00000518241 520 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX3Q99909 WBP1LP3-201ENST00000523033 208 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 TRIM51DP-201ENST00000529746 596 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 OR6M2P-201ENST00000529831 871 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX3Q99909 NANOGNBP2-201ENST00000544753 553 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.88□□□□□ -1.63
SSX3Q99909 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SSX3Q99909 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX3Q99909 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX3Q99909 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX3Q99909 AP005119.1-201ENST00000580956 292 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.88□□□□□ -1.63
SSX3Q99909 AC005244.1-201ENST00000582566 339 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX3Q99909 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX3Q99909 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX3Q99909 AC004890.3-201ENST00000605566 1095 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AC108673.3-201ENST00000609183 335 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX3Q99909 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX3Q99909 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SSX3Q99909 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
SSX3Q99909 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.88□□□□□ -1.63
SSX3Q99909 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX3Q99909 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SSX3Q99909 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.88□□□□□ -1.63
SSX3Q99909 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 RBPJP7-201ENST00000442803 1447 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 RBPJP5-201ENST00000449433 1447 ntBASIC4.88□□□□□ -1.63
SSX3Q99909 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSX3Q99909 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX3Q99909 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SSX3Q99909 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SSX3Q99909 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX3Q99909 GNL2P1-201ENST00000451274 2190 ntBASIC4.87□□□□□ -1.63
SSX3Q99909 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSX3Q99909 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.87□□□□□ -1.63
SSX3Q99909 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX3Q99909 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SSX3Q99909 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSX3Q99909 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms