Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC012020.1-201ENST00000624541 1728 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC096992.2-201ENST00000609553 1684 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AL672167.1-206ENST00000356293 943 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 RNU6-931P-201ENST00000363850 107 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AL672167.2-201ENST00000377164 879 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 SNORA7A-201ENST00000384765 139 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AL034403.1-201ENST00000399414 885 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 FDPSP5-201ENST00000399474 1057 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 MIR541-201ENST00000401360 84 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AL359694.1-201ENST00000403247 604 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 GTF2IP7-202ENST00000436677 309 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AL034369.1-201ENST00000453808 477 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 RPS3AP49-201ENST00000472161 790 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 RPL7P41-201ENST00000485823 957 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 WBP1LP4-201ENST00000505043 344 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC138409.2-202ENST00000507274 458 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC109458.1-201ENST00000508858 316 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 SUMO2P7-201ENST00000511179 285 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC010587.2-201ENST00000511727 448 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC106038.2-201ENST00000520706 568 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC091304.4-201ENST00000565703 620 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 RN7SL270P-201ENST00000579643 281 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC087683.1-201ENST00000591187 441 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC090181.2-201ENST00000602975 672 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC009509.4-201ENST00000619202 509 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC099654.13-201ENST00000639774 207 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC099654.15-201ENST00000639802 509 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 SEC63P2-201ENST00000503863 1939 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 CASC19-248ENST00000641674 1356 ntBASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.31□□□□□ -1.4
PTCHD1Q96NR3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 SPATA2P1-201ENST00000431223 2055 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 AC005539.1-201ENST00000443768 1479 ntBASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PTCHD1Q96NR3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms