Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LMO3Q8TAP4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LMO3Q8TAP4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LMO3Q8TAP4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LMO3Q8TAP4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LMO3Q8TAP4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LMO3Q8TAP4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
LMO3Q8TAP4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
LMO3Q8TAP4 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LMO3Q8TAP4 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AC006210.2-201ENST00000367074 1545 ntBASIC5.69□□□□□ -1.5
LMO3Q8TAP4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AC009804.1-201ENST00000400949 179 ntBASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AL513325.1-201ENST00000417716 1034 ntBASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AC073310.1-201ENST00000423226 1033 ntBASIC5.69□□□□□ -1.5
LMO3Q8TAP4 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 PPP1R11P1-201ENST00000486095 376 ntBASIC5.69□□□□□ -1.5
LMO3Q8TAP4 RN7SL101P-201ENST00000496350 279 ntBASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 WBP1LP8-201ENST00000617401 327 ntBASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AC005840.5-201ENST00000619166 599 ntBASIC5.69□□□□□ -1.5
LMO3Q8TAP4 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LMO3Q8TAP4 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.69□□□□□ -1.5
LMO3Q8TAP4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC023421.1-201ENST00000590535 1785 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC002525.1-201ENST00000624392 1622 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AL390879.2-203ENST00000426943 1121 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 CYCSP6-201ENST00000434498 302 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 SCAND3P1-201ENST00000439854 1060 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 RPL12P11-201ENST00000439970 501 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 CYCSP53-201ENST00000455540 265 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC011225.1-201ENST00000457751 369 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 PGAM1P13-201ENST00000507497 754 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 RN7SKP157-201ENST00000516174 282 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC090286.3-201ENST00000573133 187 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC090330.1-201ENST00000588646 764 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC009597.2-201ENST00000604659 592 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC034229.4-201ENST00000607861 441 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AL391597.1-201ENST00000618707 694 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AP000432.2-201ENST00000624164 2048 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LMO3Q8TAP4 BRAFP1-201ENST00000445336 2703 ntBASIC5.68□□□□□ -1.5
LMO3Q8TAP4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms