Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 RNU6-252P-201ENST00000363232 107 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 REREP1Y-201ENST00000422655 198 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 DPY19L1P2-201ENST00000426647 915 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 REREP2Y-201ENST00000439103 200 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AC022431.1-201ENST00000450941 438 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AC108751.3-201ENST00000461814 1020 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 UBFD1P1-201ENST00000473259 814 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AC092902.1-201ENST00000486999 259 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 MTND3P3-201ENST00000505004 126 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 RNU6-334P-201ENST00000517072 102 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AC013701.1-201ENST00000522657 465 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 HMGB1P42-201ENST00000532126 553 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 SS18L2P2-201ENST00000583960 235 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AC018926.1-201ENST00000616335 435 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AL031658.2-201ENST00000616850 651 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AP005431.1-201ENST00000618479 319 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 SAMMSON-209ENST00000641222 1100 ntBASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRTM4Q86VH4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AC005224.3-201ENST00000584683 2140 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 GCNT6-201ENST00000379591 934 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 RNU4-27P-201ENST00000410889 139 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 VN1R42P-201ENST00000424651 344 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 RPS6P14-201ENST00000425165 719 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 MTND6P12-201ENST00000428247 522 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AL035458.1-201ENST00000433096 585 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AL512661.1-201ENST00000434586 1253 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 MTND2P2-201ENST00000434633 945 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AC096775.1-201ENST00000437724 448 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 RPL31P15-201ENST00000449770 338 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 CIR1P1-201ENST00000524055 1133 ntBASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.72□□□□□ -1.49
LRRTM4Q86VH4 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms