Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL512286.1-201ENST00000439244 400 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AL022238.1-201ENST00000442557 355 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC011742.2-201ENST00000443818 352 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 BUD31P2-201ENST00000449374 300 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AL591363.1-201ENST00000450091 483 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AL591379.2-201ENST00000450223 397 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC063955.1-201ENST00000462872 685 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC022336.1-201ENST00000475510 337 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC095057.1-201ENST00000507583 168 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 RNU6-943P-201ENST00000516960 98 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 MTND6P19-201ENST00000519399 524 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AL121821.2-201ENST00000556081 394 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 MIR3912-201ENST00000577566 105 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 MIR3913-1-201ENST00000577744 102 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 BNIP3P22-201ENST00000593399 556 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AL021918.1-201ENST00000603933 236 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC140658.6-201ENST00000603958 201 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC087623.4-201ENST00000606593 695 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AL021368.3-201ENST00000607119 578 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC011504.1-201ENST00000623331 4103 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC109454.4-201ENST00000623411 649 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 PSMC1P7-201ENST00000495689 1315 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 AC137056.2-201ENST00000624055 1958 ntBASIC7.48□□□□□ -1.21
FOXR1Q6PIV2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AC017007.4-201ENST00000503353 1352 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 VN2R1P-201ENST00000449668 1743 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 Y_RNA.58-201ENST00000362807 102 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 Y_RNA.154-201ENST00000363624 102 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 Y_RNA.279-201ENST00000364763 95 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 RNY3P1-201ENST00000365085 102 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 RNY3-201ENST00000365484 102 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 Y_RNA.490-201ENST00000384413 102 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 MIR199B-201ENST00000384849 110 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 CNN3P1-201ENST00000401596 935 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AL391422.1-201ENST00000402155 436 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 RPSAP1-201ENST00000421328 880 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AC009237.2-201ENST00000421358 284 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 GTF2IP23-201ENST00000423746 351 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 SUMO2P8-201ENST00000434672 286 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 ARMC4P1-201ENST00000438905 707 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 RN7SL19P-201ENST00000462522 306 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 TUBBP11-201ENST00000472255 252 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 RN7SL861P-201ENST00000473793 285 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 CCDC11P1-201ENST00000503137 1162 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AC093325.1-201ENST00000508378 326 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 LINC01085-203ENST00000511195 326 ntBASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC7.47□□□□□ -1.21
FOXR1Q6PIV2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms