Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 PRPF19P1-201ENST00000584766 898 ntBASIC5.57□□□□□ -1.52
LRRC38Q5VT99 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 GMCL1P2-201ENST00000605230 823 ntBASIC5.57□□□□□ -1.52
LRRC38Q5VT99 MIR1910-201ENST00000636955 80 ntBASIC5.57□□□□□ -1.52
LRRC38Q5VT99 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 AC006210.2-201ENST00000367074 1545 ntBASIC5.57□□□□□ -1.52
LRRC38Q5VT99 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 AC011755.1-201ENST00000623763 2049 ntBASIC5.57□□□□□ -1.52
LRRC38Q5VT99 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.57□□□□□ -1.52
LRRC38Q5VT99 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 TRIM51GP-201ENST00000534741 1350 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 GABARAPL3-201ENST00000412799 354 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 RPL12P9-201ENST00000412942 488 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AL034379.1-201ENST00000423216 253 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 NOP56P2-201ENST00000447491 769 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 RPS27AP2-201ENST00000457576 465 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC093827.1-201ENST00000480094 861 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 HMGB3P14-201ENST00000494195 599 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC090638.1-201ENST00000498296 909 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 RN7SKP99-201ENST00000517028 307 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 YWHABP2-201ENST00000540201 713 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AP000619.2-201ENST00000546014 969 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 BLZF2P-201ENST00000553776 1130 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 QTRT1P1-201ENST00000604344 1078 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC005252.1-201ENST00000604518 1063 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC009597.2-201ENST00000604659 592 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC000068.2-201ENST00000608816 460 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC117490.2-201ENST00000610042 594 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AP000473.2-201ENST00000602659 1537 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC023421.1-201ENST00000590535 1785 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AC083837.1-201ENST00000565297 2994 ntBASIC5.56□□□□□ -1.52
LRRC38Q5VT99 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
LRRC38Q5VT99 AL022311.1-201ENST00000623726 19416 ntBASIC5.55□□□□□ -1.52
LRRC38Q5VT99 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 GVINP1-202ENST00000531871 7271 ntBASIC5.55□□□□□ -1.52
LRRC38Q5VT99 OR9K1P-201ENST00000326513 941 ntBASIC5.55□□□□□ -1.52
LRRC38Q5VT99 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 AL391422.1-201ENST00000402155 436 ntBASIC5.55□□□□□ -1.52
LRRC38Q5VT99 NPM1P37-201ENST00000403105 874 ntBASIC5.55□□□□□ -1.52
LRRC38Q5VT99 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 AC073109.1-201ENST00000445066 978 ntBASIC5.55□□□□□ -1.52
LRRC38Q5VT99 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.55□□□□□ -1.52
LRRC38Q5VT99 RPL7P41-201ENST00000485823 957 ntBASIC5.55□□□□□ -1.52
LRRC38Q5VT99 EIF1P7-201ENST00000487533 337 ntBASIC5.55□□□□□ -1.52
LRRC38Q5VT99 ENPP7P11-201ENST00000505915 627 ntBASIC5.55□□□□□ -1.52
LRRC38Q5VT99 RNU6-551P-201ENST00000516661 103 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms