Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 AC009127.1-201ENST00000467090 155 ntBASIC6.38□□□□□ -1.39
PDS5AQ29RF7 AC097484.1-201ENST00000471148 389 ntBASIC6.38□□□□□ -1.39
PDS5AQ29RF7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 MTND5P12-201ENST00000502851 1449 ntBASIC6.38□□□□□ -1.39
PDS5AQ29RF7 AC006427.1-201ENST00000514359 712 ntBASIC6.38□□□□□ -1.39
PDS5AQ29RF7 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 OR5D15P-201ENST00000531671 942 ntBASIC6.38□□□□□ -1.39
PDS5AQ29RF7 AP002373.2-201ENST00000541631 1060 ntBASIC6.38□□□□□ -1.39
PDS5AQ29RF7 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 AP000619.2-201ENST00000546014 969 ntBASIC6.38□□□□□ -1.39
PDS5AQ29RF7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 AC009597.2-201ENST00000604659 592 ntBASIC6.38□□□□□ -1.39
PDS5AQ29RF7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDS5AQ29RF7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 AC079298.1-201ENST00000625026 1619 ntBASIC6.37□□□□□ -1.39
PDS5AQ29RF7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 SNURFL-201ENST00000309296 343 ntBASIC6.37□□□□□ -1.39
PDS5AQ29RF7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 AC211486.3-201ENST00000412694 621 ntBASIC6.37□□□□□ -1.39
PDS5AQ29RF7 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 AL158827.1-201ENST00000416300 391 ntBASIC6.37□□□□□ -1.39
PDS5AQ29RF7 AC017019.1-201ENST00000426129 261 ntBASIC6.37□□□□□ -1.39
PDS5AQ29RF7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 OTX2P1-201ENST00000450956 354 ntBASIC6.37□□□□□ -1.39
PDS5AQ29RF7 SNRPCP3-201ENST00000474888 476 ntBASIC6.37□□□□□ -1.39
PDS5AQ29RF7 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 AC108738.1-201ENST00000603703 237 ntBASIC6.37□□□□□ -1.39
PDS5AQ29RF7 AL162431.4-201ENST00000604674 411 ntBASIC6.37□□□□□ -1.39
PDS5AQ29RF7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 AC099654.6-201ENST00000636487 512 ntBASIC6.37□□□□□ -1.39
PDS5AQ29RF7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDS5AQ29RF7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 AL078599.1-201ENST00000402075 293 ntBASIC6.36□□□□□ -1.39
PDS5AQ29RF7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.36□□□□□ -1.39
PDS5AQ29RF7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 RPS27P18-201ENST00000431701 247 ntBASIC6.36□□□□□ -1.39
PDS5AQ29RF7 AC092647.2-201ENST00000452998 253 ntBASIC6.36□□□□□ -1.39
PDS5AQ29RF7 RN7SL97P-201ENST00000486780 299 ntBASIC6.36□□□□□ -1.39
PDS5AQ29RF7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 EIF3KP3-201ENST00000514461 639 ntBASIC6.36□□□□□ -1.39
PDS5AQ29RF7 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.36□□□□□ -1.39
PDS5AQ29RF7 AC012400.1-201ENST00000518452 381 ntBASIC6.36□□□□□ -1.39
PDS5AQ29RF7 AC084033.1-201ENST00000550830 633 ntBASIC6.36□□□□□ -1.39
PDS5AQ29RF7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 AC135068.12-201ENST00000637370 931 ntBASIC6.36□□□□□ -1.39
PDS5AQ29RF7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 THAP12P4-201ENST00000528321 2266 ntBASIC6.36□□□□□ -1.39
PDS5AQ29RF7 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDS5AQ29RF7 CASC19-260ENST00000641828 2001 ntBASIC6.36□□□□□ -1.39
PDS5AQ29RF7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PDS5AQ29RF7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
PDS5AQ29RF7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PDS5AQ29RF7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDS5AQ29RF7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.35□□□□□ -1.39
PDS5AQ29RF7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDS5AQ29RF7 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
PDS5AQ29RF7 NLRP3P1-201ENST00000622303 1785 ntBASIC6.35□□□□□ -1.39
PDS5AQ29RF7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
PDS5AQ29RF7 AL589647.1-201ENST00000402485 466 ntBASIC6.35□□□□□ -1.39
PDS5AQ29RF7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.35□□□□□ -1.39
PDS5AQ29RF7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PDS5AQ29RF7 AL590399.4-201ENST00000436561 601 ntBASIC6.35□□□□□ -1.39
PDS5AQ29RF7 AC016772.1-201ENST00000444170 1261 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms