Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MAPK10-338ENST00000641647 3362 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GABPAQ06546 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GABPAQ06546 AC016745.2-201ENST00000608834 3443 ntBASIC6.19□□□□□ -1.42
GABPAQ06546 CASC19-281ENST00000642118 1554 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
GABPAQ06546 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.18□□□□□ -1.42
GABPAQ06546 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
GABPAQ06546 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.18□□□□□ -1.42
GABPAQ06546 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.18□□□□□ -1.42
GABPAQ06546 AC112255.1-201ENST00000624070 2493 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 AC131971.1-201ENST00000332881 1482 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.18□□□□□ -1.42
GABPAQ06546 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
GABPAQ06546 RNA5SP90-201ENST00000364801 99 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 MIR600-201ENST00000385007 98 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
GABPAQ06546 AL133270.1-201ENST00000402635 279 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 RN7SKP17-201ENST00000411242 351 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.18□□□□□ -1.42
GABPAQ06546 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.18□□□□□ -1.42
GABPAQ06546 AC017019.1-201ENST00000426129 261 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.18□□□□□ -1.42
GABPAQ06546 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 AP000797.2-201ENST00000475768 606 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 IGBP1P4-201ENST00000503202 879 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 AC004980.4-201ENST00000513375 203 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 EIF3KP3-201ENST00000514461 639 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 RN7SKP147-201ENST00000517154 244 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 AC012400.1-201ENST00000518452 381 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GABPAQ06546 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.18□□□□□ -1.42
GABPAQ06546 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.18□□□□□ -1.42
GABPAQ06546 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.18□□□□□ -1.42
GABPAQ06546 AL627230.1-201ENST00000613077 211 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 AL591926.8-201ENST00000616876 211 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
GABPAQ06546 THAP12P4-201ENST00000528321 2266 ntBASIC6.18□□□□□ -1.42
GABPAQ06546 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GABPAQ06546 OFD1P17-201ENST00000437639 3018 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
GABPAQ06546 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
GABPAQ06546 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.17□□□□□ -1.42
GABPAQ06546 AC073429.2-201ENST00000569694 1444 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 AP002512.4-202ENST00000641599 4530 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
GABPAQ06546 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
GABPAQ06546 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
GABPAQ06546 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
GABPAQ06546 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.17□□□□□ -1.42
GABPAQ06546 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.17□□□□□ -1.42
GABPAQ06546 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.17□□□□□ -1.42
GABPAQ06546 RBMY2KP-201ENST00000418221 992 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.17□□□□□ -1.42
GABPAQ06546 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GABPAQ06546 AC099670.2-201ENST00000435130 321 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 RHOT1P3-201ENST00000436571 331 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.17□□□□□ -1.42
GABPAQ06546 KNOP1P3-201ENST00000446933 426 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 DNAJB5P1-201ENST00000454004 806 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GABPAQ06546 NDUFB5P1-201ENST00000508134 564 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 AC006427.1-201ENST00000514359 712 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 HMGN1P9-201ENST00000515212 298 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 AC136777.2-201ENST00000522979 358 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 OR8Q1P-201ENST00000526467 655 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GABPAQ06546 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.17□□□□□ -1.42
GABPAQ06546 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.17□□□□□ -1.42
GABPAQ06546 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6.17□□□□□ -1.42
GABPAQ06546 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.17□□□□□ -1.42
GABPAQ06546 AC021422.1-201ENST00000621212 473 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.17□□□□□ -1.42
GABPAQ06546 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GABPAQ06546 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GABPAQ06546 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
GABPAQ06546 AC079298.1-201ENST00000625026 1619 ntBASIC6.17□□□□□ -1.42
GABPAQ06546 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.17□□□□□ -1.42
GABPAQ06546 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
GABPAQ06546 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.17□□□□□ -1.42
GABPAQ06546 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
GABPAQ06546 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GABPAQ06546 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
GABPAQ06546 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GABPAQ06546 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
GABPAQ06546 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
GABPAQ06546 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
GABPAQ06546 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
GABPAQ06546 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.16□□□□□ -1.42
GABPAQ06546 AL078599.1-201ENST00000402075 293 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 AL133482.1-201ENST00000415988 498 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
GABPAQ06546 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.16□□□□□ -1.42
GABPAQ06546 RBMY2QP-201ENST00000429799 1147 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.16□□□□□ -1.42
GABPAQ06546 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.16□□□□□ -1.42
GABPAQ06546 BTG3P1-201ENST00000435859 716 ntBASIC6.16□□□□□ -1.42
GABPAQ06546 PA2G4P6-201ENST00000438325 1197 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms