Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCS1Q01581 AC068870.3-201ENST00000625077 2536 ntBASIC5.11□□□□□ -1.59
HMGCS1Q01581 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS1Q01581 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS1Q01581 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS1Q01581 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS1Q01581 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS1Q01581 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 RNA5SP319-201ENST00000362768 119 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 U3.7-201ENST00000363668 216 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS1Q01581 RN7SKP206-201ENST00000410823 293 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 CHEK2P5-201ENST00000423877 246 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC104634.1-201ENST00000452720 462 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC108161.1-201ENST00000461060 402 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 RN7SL51P-201ENST00000468230 285 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS1Q01581 RN7SL423P-201ENST00000486202 304 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 RN7SL814P-201ENST00000487715 300 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC022133.1-201ENST00000490961 571 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 RN7SL466P-201ENST00000497546 295 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 KATNBL1P4-201ENST00000503545 918 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 RNA5SP230-201ENST00000517039 122 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC022360.1-201ENST00000521058 340 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS1Q01581 BLZF2P-201ENST00000553776 1130 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC015720.2-201ENST00000567709 334 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC060766.1-201ENST00000590824 627 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC011626.1-201ENST00000604710 562 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC244517.3-201ENST00000616254 1235 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 MIR4302-201ENST00000638058 60 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC092376.2-201ENST00000622621 4116 ntBASIC5.1□□□□□ -1.59
HMGCS1Q01581 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
HMGCS1Q01581 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AL031595.2-201ENST00000624215 19071 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS1Q01581 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS1Q01581 RN7SKP124-201ENST00000364730 341 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 RN7SKP153-201ENST00000365026 316 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS1Q01581 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 MIR589-201ENST00000385238 99 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 HSPA8P15-201ENST00000401676 786 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 AL391422.1-201ENST00000402155 436 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AL513325.1-201ENST00000417716 1034 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AC013410.1-201ENST00000436223 1232 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 AC012075.1-201ENST00000436549 580 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 GAPDHP25-201ENST00000447061 1001 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 RPL35AP19-201ENST00000469425 329 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 YWHABP2-201ENST00000540201 713 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AC022884.2-201ENST00000578535 580 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AL589674.2-201ENST00000604304 337 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 AL162431.4-201ENST00000604674 411 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGCS1Q01581 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGCS1Q01581 MTCO1P1-201ENST00000624263 1081 ntBASIC5.09□□□□□ -1.59
HMGCS1Q01581 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
HMGCS1Q01581 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
HMGCS1Q01581 AL138820.1-201ENST00000617901 5305 ntBASIC5.09□□□□□ -1.6
HMGCS1Q01581 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HMGCS1Q01581 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.09□□□□□ -1.6
HMGCS1Q01581 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms