Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.05□□□□□ -1.76
CCL20P78556 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCL20P78556 OR8G7P-201ENST00000616658 848 ntBASIC4.05□□□□□ -1.76
CCL20P78556 AL390318.1-201ENST00000624564 687 ntBASIC4.05□□□□□ -1.76
CCL20P78556 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.05□□□□□ -1.76
CCL20P78556 AL357140.4-201ENST00000636827 412 ntBASIC4.05□□□□□ -1.76
CCL20P78556 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCL20P78556 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.05□□□□□ -1.76
CCL20P78556 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCL20P78556 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCL20P78556 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCL20P78556 AL034370.1-201ENST00000397254 1590 ntBASIC4.05□□□□□ -1.76
CCL20P78556 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCL20P78556 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.05□□□□□ -1.76
CCL20P78556 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.05□□□□□ -1.76
CCL20P78556 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL20P78556 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CCL20P78556 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCL20P78556 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCL20P78556 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCL20P78556 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCL20P78556 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCL20P78556 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL20P78556 IL6STP1-201ENST00000346911 1020 ntBASIC4.04□□□□□ -1.76
CCL20P78556 RNA5SP131-201ENST00000365452 119 ntBASIC4.04□□□□□ -1.76
CCL20P78556 CKS1BP6-201ENST00000424932 240 ntBASIC4.04□□□□□ -1.76
CCL20P78556 PRUNEP1-201ENST00000425846 705 ntBASIC4.04□□□□□ -1.76
CCL20P78556 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.04□□□□□ -1.76
CCL20P78556 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.04□□□□□ -1.76
CCL20P78556 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.04□□□□□ -1.76
CCL20P78556 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL20P78556 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL20P78556 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL20P78556 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.04□□□□□ -1.76
CCL20P78556 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL20P78556 VDAC2P4-201ENST00000452925 711 ntBASIC4.04□□□□□ -1.76
CCL20P78556 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL20P78556 AC022795.1-201ENST00000473808 480 ntBASIC4.04□□□□□ -1.76
CCL20P78556 AC022215.1-201ENST00000481770 362 ntBASIC4.04□□□□□ -1.76
CCL20P78556 DEFB109F-201ENST00000491870 277 ntBASIC4.04□□□□□ -1.76
CCL20P78556 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.04□□□□□ -1.76
CCL20P78556 AC134698.1-201ENST00000511619 643 ntBASIC4.04□□□□□ -1.76
CCL20P78556 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.04□□□□□ -1.76
CCL20P78556 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL20P78556 AC131935.1-201ENST00000524621 333 ntBASIC4.04□□□□□ -1.76
CCL20P78556 AL049830.4-201ENST00000555149 351 ntBASIC4.04□□□□□ -1.76
CCL20P78556 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.04□□□□□ -1.76
CCL20P78556 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.04□□□□□ -1.76
CCL20P78556 AC091304.5-201ENST00000568969 158 ntBASIC4.04□□□□□ -1.76
CCL20P78556 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCL20P78556 AC087283.1-201ENST00000604029 1074 ntBASIC4.04□□□□□ -1.76
CCL20P78556 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC4.04□□□□□ -1.76
CCL20P78556 AC097505.1-201ENST00000610199 565 ntBASIC4.04□□□□□ -1.76
CCL20P78556 AC004839.1-201ENST00000610269 501 ntBASIC4.04□□□□□ -1.76
CCL20P78556 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.04□□□□□ -1.76
CCL20P78556 AC211486.4-201ENST00000621495 113 ntBASIC4.04□□□□□ -1.76
CCL20P78556 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCL20P78556 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.04□□□□□ -1.76
CCL20P78556 LINC01963-201ENST00000562038 3148 ntBASIC4.04□□□□□ -1.76
CCL20P78556 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL20P78556 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCL20P78556 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCL20P78556 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCL20P78556 CDC27P2-201ENST00000425026 1922 ntBASIC4.03□□□□□ -1.76
CCL20P78556 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.03□□□□□ -1.76
CCL20P78556 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCL20P78556 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCL20P78556 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.03□□□□□ -1.76
CCL20P78556 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCL20P78556 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCL20P78556 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCL20P78556 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCL20P78556 RNU1-94P-201ENST00000362627 173 ntBASIC4.03□□□□□ -1.76
CCL20P78556 RNU6-249P-201ENST00000363016 102 ntBASIC4.03□□□□□ -1.76
CCL20P78556 RNA5SP433-201ENST00000364491 114 ntBASIC4.03□□□□□ -1.76
CCL20P78556 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.03□□□□□ -1.76
CCL20P78556 AL512422.1-201ENST00000407033 553 ntBASIC4.03□□□□□ -1.76
CCL20P78556 RNA5SP296-201ENST00000410523 111 ntBASIC4.03□□□□□ -1.76
CCL20P78556 OR2AT2P-201ENST00000413438 905 ntBASIC4.03□□□□□ -1.76
CCL20P78556 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.03□□□□□ -1.76
CCL20P78556 AC104843.2-201ENST00000427666 297 ntBASIC4.03□□□□□ -1.76
CCL20P78556 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.03□□□□□ -1.76
CCL20P78556 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.03□□□□□ -1.76
CCL20P78556 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.03□□□□□ -1.76
CCL20P78556 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.03□□□□□ -1.76
CCL20P78556 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.03□□□□□ -1.76
CCL20P78556 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.03□□□□□ -1.76
CCL20P78556 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC4.03□□□□□ -1.76
CCL20P78556 AC079168.1-201ENST00000458741 345 ntBASIC4.03□□□□□ -1.76
CCL20P78556 RNU7-157P-201ENST00000459600 66 ntBASIC4.03□□□□□ -1.76
CCL20P78556 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.03□□□□□ -1.76
CCL20P78556 OR11I1P-201ENST00000486033 954 ntBASIC4.03□□□□□ -1.76
CCL20P78556 RN7SL423P-201ENST00000486202 304 ntBASIC4.03□□□□□ -1.76
CCL20P78556 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCL20P78556 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.03□□□□□ -1.76
CCL20P78556 RPEP1-201ENST00000504507 658 ntBASIC4.03□□□□□ -1.76
CCL20P78556 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.03□□□□□ -1.76
CCL20P78556 AC006427.1-201ENST00000514359 712 ntBASIC4.03□□□□□ -1.76
CCL20P78556 RNA5SP441-201ENST00000516809 88 ntBASIC4.03□□□□□ -1.76
CCL20P78556 AC134698.5-201ENST00000519444 336 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms