Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 RNU1-87P-201ENST00000363727 170 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 MIR188-201ENST00000385034 86 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 RNU6-1242P-201ENST00000391052 103 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 ATP5F1P2-201ENST00000398143 760 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 GCNT1P4-201ENST00000404096 329 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX6-1P78426 RPL23AP85-201ENST00000421838 433 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX6-1P78426 C1DP1-201ENST00000426049 402 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 RPS29P14-201ENST00000431518 171 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX6-1P78426 DNAJA1P5-201ENST00000440278 943 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 H3F3BP1-201ENST00000440551 403 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AL020997.1-201ENST00000446554 349 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX6-1P78426 HMGB1P7-201ENST00000450921 612 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 NPM1P13-201ENST00000452663 865 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 VN1R40P-201ENST00000455196 941 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX6-1P78426 RPL7P51-201ENST00000490532 749 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX6-1P78426 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX6-1P78426 IMPA1P1-201ENST00000510718 842 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AC008429.2-201ENST00000523057 864 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.68□□□□□ -1.5
NKX6-1P78426 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AC124293.1-201ENST00000530034 493 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 MTCO2P15-201ENST00000532655 656 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX6-1P78426 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX6-1P78426 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX6-1P78426 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AL162632.2-201ENST00000553933 399 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX6-1P78426 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AL589863.1-201ENST00000595383 631 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AC119501.1-201ENST00000603646 475 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AC009039.2-201ENST00000624524 529 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX6-1P78426 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AC140479.2-201ENST00000421567 3130 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 ZNF876P-202ENST00000398732 1485 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 AC104966.1-201ENST00000467010 1464 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AL359091.1-201ENST00000449048 1734 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX6-1P78426 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX6-1P78426 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NKX6-1P78426 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NKX6-1P78426 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.67□□□□□ -1.5
NKX6-1P78426 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.67□□□□□ -1.5
NKX6-1P78426 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
NKX6-1P78426 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NKX6-1P78426 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX6-1P78426 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX6-1P78426 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX6-1P78426 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NKX6-1P78426 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NKX6-1P78426 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX6-1P78426 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NKX6-1P78426 RNU6-1339P-201ENST00000363574 91 ntBASIC5.67□□□□□ -1.5
NKX6-1P78426 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.67□□□□□ -1.5
NKX6-1P78426 AL356320.2-201ENST00000417263 507 ntBASIC5.67□□□□□ -1.5
NKX6-1P78426 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX6-1P78426 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.67□□□□□ -1.5
NKX6-1P78426 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
NKX6-1P78426 RPF2P1-201ENST00000424137 906 ntBASIC5.67□□□□□ -1.5
NKX6-1P78426 USP9YP11-201ENST00000427537 717 ntBASIC5.67□□□□□ -1.5
NKX6-1P78426 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX6-1P78426 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NKX6-1P78426 NANOGP2-201ENST00000435391 727 ntBASIC5.67□□□□□ -1.5
NKX6-1P78426 RPL5P7-201ENST00000444235 813 ntBASIC5.67□□□□□ -1.5
NKX6-1P78426 AC068135.1-201ENST00000446164 246 ntBASIC5.67□□□□□ -1.5
NKX6-1P78426 OR6K5P-201ENST00000447050 945 ntBASIC5.67□□□□□ -1.5
NKX6-1P78426 AC005002.1-201ENST00000447458 540 ntBASIC5.67□□□□□ -1.5
NKX6-1P78426 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX6-1P78426 RANP1-206ENST00000455094 651 ntBASIC5.67□□□□□ -1.5
NKX6-1P78426 AL355032.1-201ENST00000472981 438 ntBASIC5.67□□□□□ -1.5
NKX6-1P78426 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX6-1P78426 AC091959.2-201ENST00000477363 321 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms