Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.69□□□□□ -1.66
ACTBP60709 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.69□□□□□ -1.66
ACTBP60709 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.69□□□□□ -1.66
ACTBP60709 AL139041.1-201ENST00000605480 610 ntBASIC4.69□□□□□ -1.66
ACTBP60709 AC107021.2-201ENST00000567714 2095 ntBASIC4.69□□□□□ -1.66
ACTBP60709 AL929601.4-201ENST00000613011 1341 ntBASIC4.69□□□□□ -1.66
ACTBP60709 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.69□□□□□ -1.66
ACTBP60709 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ACTBP60709 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ACTBP60709 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ACTBP60709 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ACTBP60709 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
ACTBP60709 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ACTBP60709 PDZK1P1-202ENST00000425209 1350 ntBASIC4.68□□□□□ -1.66
ACTBP60709 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ACTBP60709 GAPDHP24-201ENST00000328713 983 ntBASIC4.68□□□□□ -1.66
ACTBP60709 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.68□□□□□ -1.66
ACTBP60709 RNU1-19P-201ENST00000363306 165 ntBASIC4.68□□□□□ -1.66
ACTBP60709 AL672167.2-201ENST00000377164 879 ntBASIC4.68□□□□□ -1.66
ACTBP60709 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
ACTBP60709 AC211486.3-201ENST00000412694 621 ntBASIC4.68□□□□□ -1.66
ACTBP60709 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.68□□□□□ -1.66
ACTBP60709 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 BX119321.1-201ENST00000428912 797 ntBASIC4.68□□□□□ -1.66
ACTBP60709 AC126120.1-201ENST00000431082 470 ntBASIC4.68□□□□□ -1.66
ACTBP60709 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 RBMY2TP-201ENST00000451162 947 ntBASIC4.68□□□□□ -1.66
ACTBP60709 ACA64.1-201ENST00000459171 127 ntBASIC4.68□□□□□ -1.66
ACTBP60709 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ACTBP60709 DUTP7-201ENST00000507982 486 ntBASIC4.68□□□□□ -1.66
ACTBP60709 OR5H7P-201ENST00000514084 930 ntBASIC4.68□□□□□ -1.66
ACTBP60709 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 AC100784.1-201ENST00000522790 310 ntBASIC4.68□□□□□ -1.66
ACTBP60709 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 TOMM20P1-201ENST00000534518 427 ntBASIC4.68□□□□□ -1.66
ACTBP60709 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 AC006530.1-201ENST00000555980 571 ntBASIC4.68□□□□□ -1.66
ACTBP60709 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 FAM27E4-201ENST00000605259 342 ntBASIC4.68□□□□□ -1.66
ACTBP60709 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.68□□□□□ -1.66
ACTBP60709 MIR6071-201ENST00000616741 78 ntBASIC4.68□□□□□ -1.66
ACTBP60709 AL158062.1-201ENST00000619632 745 ntBASIC4.68□□□□□ -1.66
ACTBP60709 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.68□□□□□ -1.66
ACTBP60709 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.68□□□□□ -1.66
ACTBP60709 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 THAP12P5-201ENST00000405864 2275 ntBASIC4.68□□□□□ -1.66
ACTBP60709 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.68□□□□□ -1.66
ACTBP60709 AC104118.1-201ENST00000607625 1589 ntBASIC4.68□□□□□ -1.66
ACTBP60709 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ACTBP60709 AC107027.3-201ENST00000565095 3473 ntBASIC4.68□□□□□ -1.66
ACTBP60709 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ACTBP60709 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ACTBP60709 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
ACTBP60709 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
ACTBP60709 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ACTBP60709 AC079298.1-201ENST00000625026 1619 ntBASIC4.68□□□□□ -1.66
ACTBP60709 NEAT1-202ENST00000501122 22743 ntBASIC4.68□□□□□ -1.66
ACTBP60709 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ACTBP60709 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ACTBP60709 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ACTBP60709 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ACTBP60709 AC003973.3-201ENST00000624863 2822 ntBASIC4.67□□□□□ -1.66
ACTBP60709 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.67□□□□□ -1.66
ACTBP60709 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ACTBP60709 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.67□□□□□ -1.66
ACTBP60709 RNA5SP477-201ENST00000362639 119 ntBASIC4.67□□□□□ -1.66
ACTBP60709 RNA5SP30-201ENST00000365552 115 ntBASIC4.67□□□□□ -1.66
ACTBP60709 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ACTBP60709 SUGT1P2-201ENST00000379452 992 ntBASIC4.67□□□□□ -1.66
ACTBP60709 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.67□□□□□ -1.66
ACTBP60709 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.67□□□□□ -1.66
ACTBP60709 AC013470.3-201ENST00000420252 1194 ntBASIC4.67□□□□□ -1.66
ACTBP60709 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.67□□□□□ -1.66
ACTBP60709 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.67□□□□□ -1.66
ACTBP60709 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.67□□□□□ -1.66
ACTBP60709 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.67□□□□□ -1.66
ACTBP60709 PCNPP2-201ENST00000441651 455 ntBASIC4.67□□□□□ -1.66
ACTBP60709 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ACTBP60709 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.67□□□□□ -1.66
ACTBP60709 NPM1P29-201ENST00000483112 803 ntBASIC4.67□□□□□ -1.66
ACTBP60709 AC022133.1-201ENST00000490961 571 ntBASIC4.67□□□□□ -1.66
ACTBP60709 OR2A3P-201ENST00000493774 953 ntBASIC4.67□□□□□ -1.66
ACTBP60709 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.67□□□□□ -1.66
ACTBP60709 Y_RNA.667-201ENST00000516212 107 ntBASIC4.67□□□□□ -1.66
ACTBP60709 RNA5SP438-201ENST00000516561 112 ntBASIC4.67□□□□□ -1.66
ACTBP60709 SCARNA20.4-201ENST00000516969 131 ntBASIC4.67□□□□□ -1.66
ACTBP60709 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.67□□□□□ -1.66
ACTBP60709 AC022360.1-201ENST00000521058 340 ntBASIC4.67□□□□□ -1.66
ACTBP60709 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.67□□□□□ -1.66
ACTBP60709 AC130364.2-201ENST00000528639 604 ntBASIC4.67□□□□□ -1.66
ACTBP60709 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ACTBP60709 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.67□□□□□ -1.66
ACTBP60709 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.67□□□□□ -1.66
ACTBP60709 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms