Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN6P56747 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN6P56747 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
CLDN6P56747 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.23□□□□□ -1.57
CLDN6P56747 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.22□□□□□ -1.57
CLDN6P56747 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 AC140134.1-201ENST00000511830 3544 ntBASIC5.22□□□□□ -1.57
CLDN6P56747 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN6P56747 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 MT-RNR2-201ENST00000387347 1559 ntBASIC5.22□□□□□ -1.57
CLDN6P56747 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLDN6P56747 AL050305.1-201ENST00000399993 1230 ntBASIC5.22□□□□□ -1.57
CLDN6P56747 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.22□□□□□ -1.57
CLDN6P56747 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.22□□□□□ -1.57
CLDN6P56747 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.22□□□□□ -1.57
CLDN6P56747 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.22□□□□□ -1.57
CLDN6P56747 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN6P56747 RPS29P22-201ENST00000472363 168 ntBASIC5.22□□□□□ -1.57
CLDN6P56747 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.22□□□□□ -1.57
CLDN6P56747 RPS7P6-201ENST00000485777 579 ntBASIC5.22□□□□□ -1.57
CLDN6P56747 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN6P56747 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
CLDN6P56747 SCARNA16.4-201ENST00000516956 187 ntBASIC5.22□□□□□ -1.57
CLDN6P56747 AC092490.3-201ENST00000545370 572 ntBASIC5.22□□□□□ -1.57
CLDN6P56747 AC018552.1-201ENST00000562099 811 ntBASIC5.22□□□□□ -1.57
CLDN6P56747 AC105036.1-201ENST00000566222 271 ntBASIC5.22□□□□□ -1.57
CLDN6P56747 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.22□□□□□ -1.57
CLDN6P56747 DHFRP1-201ENST00000579682 559 ntBASIC5.22□□□□□ -1.57
CLDN6P56747 AC023389.2-201ENST00000580031 955 ntBASIC5.22□□□□□ -1.57
CLDN6P56747 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN6P56747 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CLDN6P56747 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLDN6P56747 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.22□□□□□ -1.57
CLDN6P56747 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.22□□□□□ -1.57
CLDN6P56747 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN6P56747 CDY11P-201ENST00000447168 1651 ntBASIC5.21□□□□□ -1.57
CLDN6P56747 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CLDN6P56747 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CLDN6P56747 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN6P56747 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN6P56747 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN6P56747 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CLDN6P56747 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN6P56747 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDN6P56747 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CLDN6P56747 AC140479.2-201ENST00000421567 3130 ntBASIC5.21□□□□□ -1.58
CLDN6P56747 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CLDN6P56747 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
CLDN6P56747 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLDN6P56747 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN6P56747 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN6P56747 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLDN6P56747 SNORA11-201ENST00000408789 128 ntBASIC5.21□□□□□ -1.58
CLDN6P56747 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN6P56747 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDN6P56747 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN6P56747 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDN6P56747 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN6P56747 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLDN6P56747 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN6P56747 TPT1P13-201ENST00000449760 499 ntBASIC5.21□□□□□ -1.58
CLDN6P56747 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN6P56747 AC092647.2-201ENST00000452998 253 ntBASIC5.21□□□□□ -1.58
CLDN6P56747 AC093815.1-201ENST00000508637 280 ntBASIC5.21□□□□□ -1.58
CLDN6P56747 ST13P12-201ENST00000508958 1094 ntBASIC5.21□□□□□ -1.58
CLDN6P56747 MTND6P2-201ENST00000512226 524 ntBASIC5.21□□□□□ -1.58
CLDN6P56747 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDN6P56747 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN6P56747 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.21□□□□□ -1.58
CLDN6P56747 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN6P56747 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN6P56747 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDN6P56747 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.21□□□□□ -1.58
CLDN6P56747 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN6P56747 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDN6P56747 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
CLDN6P56747 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLDN6P56747 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CLDN6P56747 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN6P56747 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDN6P56747 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN6P56747 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLDN6P56747 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms