Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH4P55283 AC074386.1-201ENST00000476560 767 ntBASIC5.5□□□□□ -1.53
CDH4P55283 RN7SL177P-201ENST00000476596 299 ntBASIC5.5□□□□□ -1.53
CDH4P55283 RPL7P6-201ENST00000480903 738 ntBASIC5.5□□□□□ -1.53
CDH4P55283 RN7SL423P-201ENST00000486202 304 ntBASIC5.5□□□□□ -1.53
CDH4P55283 AC105420.1-201ENST00000504389 582 ntBASIC5.5□□□□□ -1.53
CDH4P55283 CDC42P3-201ENST00000518493 633 ntBASIC5.5□□□□□ -1.53
CDH4P55283 KCTD9P6-201ENST00000522306 950 ntBASIC5.5□□□□□ -1.53
CDH4P55283 AC004825.1-201ENST00000555068 586 ntBASIC5.5□□□□□ -1.53
CDH4P55283 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH4P55283 MIR1269B-201ENST00000580405 75 ntBASIC5.5□□□□□ -1.53
CDH4P55283 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH4P55283 MIR7853-201ENST00000584820 132 ntBASIC5.5□□□□□ -1.53
CDH4P55283 AC002069.2-201ENST00000603580 883 ntBASIC5.5□□□□□ -1.53
CDH4P55283 AC005252.1-201ENST00000604518 1063 ntBASIC5.5□□□□□ -1.53
CDH4P55283 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH4P55283 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH4P55283 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH4P55283 AP003400.3-201ENST00000624904 346 ntBASIC5.5□□□□□ -1.53
CDH4P55283 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH4P55283 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH4P55283 PABPC1P6-201ENST00000445594 1829 ntBASIC5.5□□□□□ -1.53
CDH4P55283 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH4P55283 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH4P55283 AC235565.1-201ENST00000456962 1325 ntBASIC5.49□□□□□ -1.53
CDH4P55283 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH4P55283 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.49□□□□□ -1.53
CDH4P55283 AC092070.2-203ENST00000598377 3644 ntBASIC5.49□□□□□ -1.53
CDH4P55283 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH4P55283 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH4P55283 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH4P55283 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 AC010740.1-201ENST00000417035 684 ntBASIC5.49□□□□□ -1.53
CDH4P55283 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 BX510359.3-201ENST00000422168 306 ntBASIC5.49□□□□□ -1.53
CDH4P55283 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH4P55283 OR52B5P-201ENST00000435337 951 ntBASIC5.49□□□□□ -1.53
CDH4P55283 AL163193.1-201ENST00000444895 788 ntBASIC5.49□□□□□ -1.53
CDH4P55283 VN1R96P-201ENST00000446052 858 ntBASIC5.49□□□□□ -1.53
CDH4P55283 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDH4P55283 AC058823.1-201ENST00000485315 474 ntBASIC5.49□□□□□ -1.53
CDH4P55283 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH4P55283 RNA5SP34-201ENST00000516887 130 ntBASIC5.49□□□□□ -1.53
CDH4P55283 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH4P55283 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH4P55283 AC106730.2-201ENST00000566641 540 ntBASIC5.49□□□□□ -1.53
CDH4P55283 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH4P55283 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CDH4P55283 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH4P55283 AC069307.1-201ENST00000602820 447 ntBASIC5.49□□□□□ -1.53
CDH4P55283 AC009027.1-201ENST00000604510 479 ntBASIC5.49□□□□□ -1.53
CDH4P55283 RNU6-84P-201ENST00000607737 102 ntBASIC5.49□□□□□ -1.53
CDH4P55283 AC007786.3-201ENST00000615154 596 ntBASIC5.49□□□□□ -1.53
CDH4P55283 OR52B5P-202ENST00000641118 1110 ntBASIC5.49□□□□□ -1.53
CDH4P55283 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH4P55283 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.49□□□□□ -1.53
CDH4P55283 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 HCFC2P1-201ENST00000392864 1592 ntBASIC5.49□□□□□ -1.53
CDH4P55283 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH4P55283 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH4P55283 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH4P55283 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH4P55283 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH4P55283 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH4P55283 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH4P55283 RNA5SP453-201ENST00000362503 119 ntBASIC5.48□□□□□ -1.53
CDH4P55283 MIR223-201ENST00000385204 110 ntBASIC5.48□□□□□ -1.53
CDH4P55283 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH4P55283 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH4P55283 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.48□□□□□ -1.53
CDH4P55283 AL354868.1-201ENST00000417077 482 ntBASIC5.48□□□□□ -1.53
CDH4P55283 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH4P55283 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH4P55283 BX276092.6-201ENST00000430476 250 ntBASIC5.48□□□□□ -1.53
CDH4P55283 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH4P55283 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH4P55283 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH4P55283 BX276092.8-201ENST00000455722 250 ntBASIC5.48□□□□□ -1.53
CDH4P55283 AC079168.1-201ENST00000458741 345 ntBASIC5.48□□□□□ -1.53
CDH4P55283 RN7SL172P-201ENST00000460535 303 ntBASIC5.48□□□□□ -1.53
CDH4P55283 RPS4XP14-201ENST00000493072 781 ntBASIC5.48□□□□□ -1.53
CDH4P55283 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH4P55283 RNA5SP373-201ENST00000517271 95 ntBASIC5.48□□□□□ -1.53
CDH4P55283 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH4P55283 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH4P55283 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH4P55283 OR4A43P-201ENST00000532938 908 ntBASIC5.48□□□□□ -1.53
CDH4P55283 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH4P55283 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms