Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
CLTCL1P53675 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.35□□□□□ -1.23
CLTCL1P53675 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC7.35□□□□□ -1.23
CLTCL1P53675 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CLTCL1P53675 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
CLTCL1P53675 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.35□□□□□ -1.23
CLTCL1P53675 AC016397.1-201ENST00000412463 242 ntBASIC7.35□□□□□ -1.23
CLTCL1P53675 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.35□□□□□ -1.23
CLTCL1P53675 AL137845.2-201ENST00000444292 988 ntBASIC7.35□□□□□ -1.23
CLTCL1P53675 FTH1P2-201ENST00000466086 412 ntBASIC7.35□□□□□ -1.23
CLTCL1P53675 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC7.35□□□□□ -1.23
CLTCL1P53675 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.35□□□□□ -1.23
CLTCL1P53675 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.35□□□□□ -1.23
CLTCL1P53675 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC7.35□□□□□ -1.23
CLTCL1P53675 RN7SL690P-201ENST00000582087 240 ntBASIC7.35□□□□□ -1.23
CLTCL1P53675 EIF1P5-201ENST00000585002 234 ntBASIC7.35□□□□□ -1.23
CLTCL1P53675 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC7.35□□□□□ -1.23
CLTCL1P53675 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.35□□□□□ -1.23
CLTCL1P53675 AC012557.1-201ENST00000607115 611 ntBASIC7.35□□□□□ -1.23
CLTCL1P53675 uc_338.7-201ENST00000621834 124 ntBASIC7.35□□□□□ -1.23
CLTCL1P53675 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLTCL1P53675 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.35□□□□□ -1.23
CLTCL1P53675 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CLTCL1P53675 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC7.35□□□□□ -1.23
CLTCL1P53675 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CLTCL1P53675 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLTCL1P53675 EEF1A1P36-201ENST00000427807 1351 ntBASIC7.35□□□□□ -1.23
CLTCL1P53675 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.35□□□□□ -1.23
CLTCL1P53675 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CLTCL1P53675 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CLTCL1P53675 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CLTCL1P53675 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC7.35□□□□□ -1.23
CLTCL1P53675 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC7.34□□□□□ -1.23
CLTCL1P53675 AC021876.1-201ENST00000425959 359 ntBASIC7.34□□□□□ -1.23
CLTCL1P53675 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC7.34□□□□□ -1.23
CLTCL1P53675 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC7.34□□□□□ -1.23
CLTCL1P53675 RPS29P9-201ENST00000440360 171 ntBASIC7.34□□□□□ -1.23
CLTCL1P53675 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.34□□□□□ -1.23
CLTCL1P53675 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC7.34□□□□□ -1.23
CLTCL1P53675 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC7.34□□□□□ -1.23
CLTCL1P53675 MORF4L1P3-201ENST00000525966 950 ntBASIC7.34□□□□□ -1.23
CLTCL1P53675 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC7.34□□□□□ -1.23
CLTCL1P53675 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CLTCL1P53675 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.34□□□□□ -1.23
CLTCL1P53675 MIR4697-201ENST00000582977 78 ntBASIC7.34□□□□□ -1.23
CLTCL1P53675 MIR4420-201ENST00000583944 77 ntBASIC7.34□□□□□ -1.23
CLTCL1P53675 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC7.34□□□□□ -1.23
CLTCL1P53675 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.34□□□□□ -1.23
CLTCL1P53675 AL391358.1-201ENST00000605342 190 ntBASIC7.34□□□□□ -1.23
CLTCL1P53675 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CLTCL1P53675 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
CLTCL1P53675 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
CLTCL1P53675 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CLTCL1P53675 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CLTCL1P53675 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CLTCL1P53675 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CLTCL1P53675 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CLTCL1P53675 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
CLTCL1P53675 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CLTCL1P53675 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.34□□□□□ -1.23
CLTCL1P53675 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CLTCL1P53675 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
CLTCL1P53675 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
CLTCL1P53675 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC7.34□□□□□ -1.24
CLTCL1P53675 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC7.34□□□□□ -1.24
CLTCL1P53675 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.34□□□□□ -1.24
CLTCL1P53675 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC7.34□□□□□ -1.24
CLTCL1P53675 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.34□□□□□ -1.24
CLTCL1P53675 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.34□□□□□ -1.24
CLTCL1P53675 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.34□□□□□ -1.24
CLTCL1P53675 AC105105.5-201ENST00000622635 1294 ntBASIC7.34□□□□□ -1.24
CLTCL1P53675 MIR7641-1-201ENST00000627518 61 ntBASIC7.34□□□□□ -1.24
CLTCL1P53675 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CLTCL1P53675 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC7.33□□□□□ -1.24
CLTCL1P53675 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CLTCL1P53675 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.33□□□□□ -1.24
CLTCL1P53675 MSL3P1-202ENST00000440028 1468 ntBASIC7.33□□□□□ -1.24
CLTCL1P53675 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CLTCL1P53675 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CLTCL1P53675 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CLTCL1P53675 PRNCR1-201ENST00000635449 12727 ntBASIC7.33□□□□□ -1.24
CLTCL1P53675 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CLTCL1P53675 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CLTCL1P53675 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CLTCL1P53675 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CLTCL1P53675 SNORA2.3-201ENST00000383920 135 ntBASIC7.33□□□□□ -1.24
CLTCL1P53675 RNU6-398P-201ENST00000384143 109 ntBASIC7.33□□□□□ -1.24
CLTCL1P53675 AC007559.1-201ENST00000428736 355 ntBASIC7.33□□□□□ -1.24
CLTCL1P53675 HSPD1P12-201ENST00000429127 1069 ntBASIC7.33□□□□□ -1.24
CLTCL1P53675 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC7.33□□□□□ -1.24
CLTCL1P53675 CEACAMP10-202ENST00000495431 496 ntBASIC7.33□□□□□ -1.24
CLTCL1P53675 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.33□□□□□ -1.24
CLTCL1P53675 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CLTCL1P53675 NMNAT1P1-201ENST00000554095 876 ntBASIC7.33□□□□□ -1.24
CLTCL1P53675 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC7.33□□□□□ -1.24
CLTCL1P53675 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC7.33□□□□□ -1.24
CLTCL1P53675 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLTCL1P53675 AC012618.3-205ENST00000637896 1496 ntBASIC7.32□□□□□ -1.24
CLTCL1P53675 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLTCL1P53675 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms