Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.29□□□□□ -1.24
USP11P51784 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.29□□□□□ -1.24
USP11P51784 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.29□□□□□ -1.24
USP11P51784 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.29□□□□□ -1.24
USP11P51784 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.29□□□□□ -1.24
USP11P51784 TNPO1P2-201ENST00000426249 2665 ntBASIC7.29□□□□□ -1.24
USP11P51784 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.29□□□□□ -1.24
USP11P51784 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USP11P51784 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.29□□□□□ -1.24
USP11P51784 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.28□□□□□ -1.24
USP11P51784 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
USP11P51784 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.28□□□□□ -1.24
USP11P51784 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USP11P51784 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.28□□□□□ -1.24
USP11P51784 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
USP11P51784 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.28□□□□□ -1.24
USP11P51784 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.28□□□□□ -1.24
USP11P51784 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USP11P51784 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.28□□□□□ -1.24
USP11P51784 OR56A4-201ENST00000330728 1209 ntBASIC7.28□□□□□ -1.24
USP11P51784 RN7SKP250-201ENST00000363924 321 ntBASIC7.28□□□□□ -1.24
USP11P51784 Y_RNA.248-201ENST00000364501 109 ntBASIC7.28□□□□□ -1.24
USP11P51784 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.28□□□□□ -1.24
USP11P51784 PSMA6P1-201ENST00000400275 741 ntBASIC7.28□□□□□ -1.24
USP11P51784 ERHP2-201ENST00000402323 299 ntBASIC7.28□□□□□ -1.24
USP11P51784 AL096711.1-201ENST00000404780 554 ntBASIC7.28□□□□□ -1.24
USP11P51784 ATF1P1-201ENST00000406040 927 ntBASIC7.28□□□□□ -1.24
USP11P51784 AC099535.1-201ENST00000408928 371 ntBASIC7.28□□□□□ -1.24
USP11P51784 RNA5SP198-201ENST00000410376 127 ntBASIC7.28□□□□□ -1.24
USP11P51784 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.28□□□□□ -1.24
USP11P51784 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.28□□□□□ -1.24
USP11P51784 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
USP11P51784 AC012519.1-201ENST00000424588 610 ntBASIC7.28□□□□□ -1.24
USP11P51784 AL606490.7-201ENST00000433136 191 ntBASIC7.28□□□□□ -1.24
USP11P51784 AL596276.1-201ENST00000434465 418 ntBASIC7.28□□□□□ -1.24
USP11P51784 AC098614.3-201ENST00000438957 440 ntBASIC7.28□□□□□ -1.24
USP11P51784 COX4I1P2-201ENST00000447446 547 ntBASIC7.28□□□□□ -1.24
USP11P51784 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USP11P51784 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.28□□□□□ -1.24
USP11P51784 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.28□□□□□ -1.24
USP11P51784 AC104763.1-201ENST00000475274 360 ntBASIC7.28□□□□□ -1.24
USP11P51784 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC7.28□□□□□ -1.24
USP11P51784 GM2AP2-201ENST00000491764 562 ntBASIC7.28□□□□□ -1.24
USP11P51784 NPM1P27-201ENST00000502784 830 ntBASIC7.28□□□□□ -1.24
USP11P51784 AC112184.1-201ENST00000505179 312 ntBASIC7.28□□□□□ -1.24
USP11P51784 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.28□□□□□ -1.24
USP11P51784 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.28□□□□□ -1.24
USP11P51784 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC7.28□□□□□ -1.24
USP11P51784 AC124293.1-201ENST00000530034 493 ntBASIC7.28□□□□□ -1.24
USP11P51784 AHI1-217ENST00000534469 680 ntTSL 3 BASIC7.28□□□□□ -1.24
USP11P51784 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.28□□□□□ -1.24
USP11P51784 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC7.28□□□□□ -1.24
USP11P51784 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.28□□□□□ -1.24
USP11P51784 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.28□□□□□ -1.24
USP11P51784 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.28□□□□□ -1.24
USP11P51784 OR2BH1P-201ENST00000608850 864 ntBASIC7.28□□□□□ -1.24
USP11P51784 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC7.28□□□□□ -1.24
USP11P51784 AC009509.4-201ENST00000619202 509 ntBASIC7.28□□□□□ -1.24
USP11P51784 AL122023.1-201ENST00000622847 530 ntBASIC7.28□□□□□ -1.24
USP11P51784 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.28□□□□□ -1.24
USP11P51784 AC010325.3-201ENST00000641084 394 ntBASIC7.28□□□□□ -1.24
USP11P51784 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
USP11P51784 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
USP11P51784 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.28□□□□□ -1.24
USP11P51784 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.28□□□□□ -1.24
USP11P51784 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.28□□□□□ -1.24
USP11P51784 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USP11P51784 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USP11P51784 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USP11P51784 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USP11P51784 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USP11P51784 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USP11P51784 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
USP11P51784 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USP11P51784 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
USP11P51784 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.27□□□□□ -1.25
USP11P51784 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.27□□□□□ -1.25
USP11P51784 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.27□□□□□ -1.25
USP11P51784 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
USP11P51784 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
USP11P51784 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
USP11P51784 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.27□□□□□ -1.25
USP11P51784 SNORD56.4-201ENST00000363883 71 ntBASIC7.27□□□□□ -1.25
USP11P51784 RNA5SP77-201ENST00000365394 120 ntBASIC7.27□□□□□ -1.25
USP11P51784 U6.112-201ENST00000384129 70 ntBASIC7.27□□□□□ -1.25
USP11P51784 AC003045.1-201ENST00000398779 713 ntBASIC7.27□□□□□ -1.25
USP11P51784 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.27□□□□□ -1.25
USP11P51784 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.27□□□□□ -1.25
USP11P51784 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.27□□□□□ -1.25
USP11P51784 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.27□□□□□ -1.25
USP11P51784 HIGD1AP12-201ENST00000427832 281 ntBASIC7.27□□□□□ -1.25
USP11P51784 BX119321.1-201ENST00000428912 797 ntBASIC7.27□□□□□ -1.25
USP11P51784 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.27□□□□□ -1.25
USP11P51784 MRPS21P3-201ENST00000436696 262 ntBASIC7.27□□□□□ -1.25
USP11P51784 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC7.27□□□□□ -1.25
USP11P51784 AC096632.2-201ENST00000438139 1239 ntBASIC7.27□□□□□ -1.25
USP11P51784 EMC3-AS1-205ENST00000438698 534 ntBASIC7.27□□□□□ -1.25
USP11P51784 AC092641.1-201ENST00000440229 772 ntBASIC7.27□□□□□ -1.25
USP11P51784 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC7.27□□□□□ -1.25
USP11P51784 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms