Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
APOBEC1P41238 AC006116.7-201ENST00000590141 756 ntBASIC5.14□□□□□ -1.59
APOBEC1P41238 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.14□□□□□ -1.59
APOBEC1P41238 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.14□□□□□ -1.59
APOBEC1P41238 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOBEC1P41238 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
APOBEC1P41238 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.14□□□□□ -1.59
APOBEC1P41238 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.14□□□□□ -1.59
APOBEC1P41238 AC079776.5-201ENST00000641920 211 ntBASIC5.14□□□□□ -1.59
APOBEC1P41238 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOBEC1P41238 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
APOBEC1P41238 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
APOBEC1P41238 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
APOBEC1P41238 MTND4P9-201ENST00000507819 1346 ntBASIC5.14□□□□□ -1.59
APOBEC1P41238 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOBEC1P41238 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
APOBEC1P41238 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
APOBEC1P41238 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOBEC1P41238 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
APOBEC1P41238 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOBEC1P41238 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.14□□□□□ -1.59
APOBEC1P41238 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOBEC1P41238 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.13□□□□□ -1.59
APOBEC1P41238 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.13□□□□□ -1.59
APOBEC1P41238 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.13□□□□□ -1.59
APOBEC1P41238 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.13□□□□□ -1.59
APOBEC1P41238 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.13□□□□□ -1.59
APOBEC1P41238 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOBEC1P41238 AL355488.2-201ENST00000609909 2850 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
APOBEC1P41238 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
APOBEC1P41238 GTF2IP4-201ENST00000453092 2054 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.13□□□□□ -1.59
APOBEC1P41238 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
APOBEC1P41238 RNA5SP30-201ENST00000365552 115 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOBEC1P41238 RPL34P3-201ENST00000421454 338 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 AL354692.1-201ENST00000423044 315 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 AC127526.2-201ENST00000426436 775 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.13□□□□□ -1.59
APOBEC1P41238 RPS10P18-201ENST00000442662 495 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.13□□□□□ -1.59
APOBEC1P41238 MOB1AP2-201ENST00000446060 614 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
APOBEC1P41238 AC098583.1-201ENST00000480875 255 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 LARP7P4-201ENST00000481075 878 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 RNU6-615P-201ENST00000516065 106 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.13□□□□□ -1.59
APOBEC1P41238 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.13□□□□□ -1.59
APOBEC1P41238 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
APOBEC1P41238 PMS2P3-207ENST00000529061 717 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.13□□□□□ -1.59
APOBEC1P41238 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.13□□□□□ -1.59
APOBEC1P41238 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.13□□□□□ -1.59
APOBEC1P41238 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.13□□□□□ -1.59
APOBEC1P41238 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.13□□□□□ -1.59
APOBEC1P41238 MIR4311-201ENST00000580794 100 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.13□□□□□ -1.59
APOBEC1P41238 AC015802.2-201ENST00000589690 189 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.13□□□□□ -1.59
APOBEC1P41238 AL049777.1-201ENST00000622740 518 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 AC092159.4-201ENST00000624944 550 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
APOBEC1P41238 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOBEC1P41238 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOBEC1P41238 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
APOBEC1P41238 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
APOBEC1P41238 TCP1P3-201ENST00000414406 1498 ntBASIC5.13□□□□□ -1.59
APOBEC1P41238 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.13□□□□□ -1.59
APOBEC1P41238 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOBEC1P41238 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOBEC1P41238 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 OR4F13P-202ENST00000560066 2054 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
APOBEC1P41238 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.12□□□□□ -1.59
APOBEC1P41238 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOBEC1P41238 LINC01963-201ENST00000562038 3148 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AL121886.1-201ENST00000358609 435 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 RNA5SP394-201ENST00000364216 119 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 MIR620-201ENST00000385232 95 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AL035405.1-201ENST00000400795 710 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 HMGB1P20-201ENST00000402555 677 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 LYPLA1P3-201ENST00000402650 695 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 ATP5F1P6-201ENST00000402768 767 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 NPM1P37-201ENST00000403105 874 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
APOBEC1P41238 RMRPP5-201ENST00000411156 267 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 RPS6P23-201ENST00000413224 722 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AL354868.1-201ENST00000417077 482 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AC092570.3-201ENST00000420113 693 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 RPS3P2-201ENST00000421346 701 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.12□□□□□ -1.59
APOBEC1P41238 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.12□□□□□ -1.59
APOBEC1P41238 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.12□□□□□ -1.59
APOBEC1P41238 AL138899.2-201ENST00000439139 499 ntBASIC5.12□□□□□ -1.59
APOBEC1P41238 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms