Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC3.8□□□□□ -1.8
CKS2P33552 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS2P33552 AGGF1P9-201ENST00000561884 913 ntBASIC3.8□□□□□ -1.8
CKS2P33552 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC3.8□□□□□ -1.8
CKS2P33552 AC002519.2-203ENST00000567043 837 ntBASIC3.8□□□□□ -1.8
CKS2P33552 AC005341.1-201ENST00000571086 708 ntBASIC3.8□□□□□ -1.8
CKS2P33552 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS2P33552 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC3.8□□□□□ -1.8
CKS2P33552 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC3.8□□□□□ -1.8
CKS2P33552 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS2P33552 AC005252.1-201ENST00000604518 1063 ntBASIC3.8□□□□□ -1.8
CKS2P33552 AL162431.4-201ENST00000604674 411 ntBASIC3.8□□□□□ -1.8
CKS2P33552 MIR6885-201ENST00000612241 66 ntBASIC3.8□□□□□ -1.8
CKS2P33552 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CKS2P33552 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS2P33552 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS2P33552 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CKS2P33552 MRE11P1-201ENST00000464884 2127 ntBASIC3.8□□□□□ -1.8
CKS2P33552 FGG-205ENST00000407946 1636 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS2P33552 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS2P33552 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CKS2P33552 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS2P33552 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS2P33552 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS2P33552 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC3.79□□□□□ -1.8
CKS2P33552 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS2P33552 RN7SKP199-201ENST00000410325 305 ntBASIC3.79□□□□□ -1.8
CKS2P33552 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC3.79□□□□□ -1.8
CKS2P33552 MEAF6P1-201ENST00000416092 327 ntBASIC3.79□□□□□ -1.8
CKS2P33552 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS2P33552 AC009238.2-201ENST00000431026 355 ntBASIC3.79□□□□□ -1.8
CKS2P33552 RPS26P4-201ENST00000431743 355 ntBASIC3.79□□□□□ -1.8
CKS2P33552 CLUHP1-201ENST00000435012 1190 ntBASIC3.79□□□□□ -1.8
CKS2P33552 OR6D1P-201ENST00000436165 939 ntBASIC3.79□□□□□ -1.8
CKS2P33552 LINC00328-2P-201ENST00000436585 219 ntBASIC3.79□□□□□ -1.8
CKS2P33552 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS2P33552 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC3.79□□□□□ -1.8
CKS2P33552 ATP6V1E1P1-201ENST00000439215 681 ntBASIC3.79□□□□□ -1.8
CKS2P33552 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC3.79□□□□□ -1.8
CKS2P33552 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CKS2P33552 AC090686.1-201ENST00000481577 749 ntBASIC3.79□□□□□ -1.8
CKS2P33552 RN7SL423P-201ENST00000486202 304 ntBASIC3.79□□□□□ -1.8
CKS2P33552 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CKS2P33552 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS2P33552 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS2P33552 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CKS2P33552 RN7SKP99-201ENST00000517028 307 ntBASIC3.79□□□□□ -1.8
CKS2P33552 RN7SKP35-201ENST00000517210 151 ntBASIC3.79□□□□□ -1.8
CKS2P33552 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS2P33552 MT1CP-201ENST00000567054 174 ntBASIC3.79□□□□□ -1.8
CKS2P33552 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC3.79□□□□□ -1.8
CKS2P33552 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC3.79□□□□□ -1.8
CKS2P33552 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.79□□□□□ -1.8
CKS2P33552 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC3.79□□□□□ -1.8
CKS2P33552 AC012511.1-201ENST00000608140 449 ntBASIC3.79□□□□□ -1.8
CKS2P33552 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.79□□□□□ -1.8
CKS2P33552 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS2P33552 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC3.79□□□□□ -1.8
CKS2P33552 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC3.79□□□□□ -1.8
CKS2P33552 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS2P33552 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS2P33552 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CKS2P33552 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CKS2P33552 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CKS2P33552 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CKS2P33552 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
CKS2P33552 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.78□□□□□ -1.8
CKS2P33552 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CKS2P33552 BTBD10P1-201ENST00000549824 1352 ntBASIC3.78□□□□□ -1.8
CKS2P33552 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.78□□□□□ -1.8
CKS2P33552 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CKS2P33552 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CKS2P33552 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CKS2P33552 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CKS2P33552 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CKS2P33552 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CKS2P33552 RNA5SP131-201ENST00000365452 119 ntBASIC3.78□□□□□ -1.8
CKS2P33552 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CKS2P33552 GCNT1P4-201ENST00000404096 329 ntBASIC3.78□□□□□ -1.8
CKS2P33552 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC3.78□□□□□ -1.8
CKS2P33552 GAPDHP34-201ENST00000432112 823 ntBASIC3.78□□□□□ -1.8
CKS2P33552 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC3.78□□□□□ -1.8
CKS2P33552 AC007383.1-201ENST00000445875 636 ntBASIC3.78□□□□□ -1.8
CKS2P33552 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CKS2P33552 VDAC2P4-201ENST00000452925 711 ntBASIC3.78□□□□□ -1.8
CKS2P33552 AL356981.1-201ENST00000454879 684 ntBASIC3.78□□□□□ -1.8
CKS2P33552 AC108161.1-201ENST00000461060 402 ntBASIC3.78□□□□□ -1.8
CKS2P33552 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.78□□□□□ -1.8
CKS2P33552 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CKS2P33552 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC3.78□□□□□ -1.8
CKS2P33552 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.78□□□□□ -1.8
CKS2P33552 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.78□□□□□ -1.8
CKS2P33552 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.78□□□□□ -1.8
CKS2P33552 MRPS16P1-201ENST00000523462 412 ntBASIC3.78□□□□□ -1.8
CKS2P33552 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC3.78□□□□□ -1.8
CKS2P33552 EIF4A2P5-201ENST00000529914 499 ntBASIC3.78□□□□□ -1.8
CKS2P33552 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CKS2P33552 AP004607.2-201ENST00000533949 322 ntBASIC3.78□□□□□ -1.8
CKS2P33552 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.78□□□□□ -1.8
CKS2P33552 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms