Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 HMGB1P7-201ENST00000450921 612 ntBASIC4.63□□□□□ -1.67
HLA-DMAP28067 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 AC090686.1-201ENST00000481577 749 ntBASIC4.63□□□□□ -1.67
HLA-DMAP28067 RPS27P20-201ENST00000492051 246 ntBASIC4.63□□□□□ -1.67
HLA-DMAP28067 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMAP28067 PRMT5P1-201ENST00000514351 598 ntBASIC4.63□□□□□ -1.67
HLA-DMAP28067 AC022360.1-201ENST00000521058 340 ntBASIC4.63□□□□□ -1.67
HLA-DMAP28067 PCNAP4-201ENST00000532690 730 ntBASIC4.63□□□□□ -1.67
HLA-DMAP28067 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 AL078601.3-201ENST00000573303 535 ntBASIC4.63□□□□□ -1.67
HLA-DMAP28067 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 AC233280.2-201ENST00000603917 1070 ntBASIC4.63□□□□□ -1.67
HLA-DMAP28067 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 FAM27E4-201ENST00000605259 342 ntBASIC4.63□□□□□ -1.67
HLA-DMAP28067 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMAP28067 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 HSPD1P9-201ENST00000420325 1636 ntBASIC4.63□□□□□ -1.67
HLA-DMAP28067 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMAP28067 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMAP28067 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMAP28067 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DMAP28067 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMAP28067 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMAP28067 OR51C1P-202ENST00000641159 1444 ntBASIC4.63□□□□□ -1.67
HLA-DMAP28067 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DMAP28067 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMAP28067 MAPK10-286ENST00000641208 8747 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMAP28067 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMAP28067 RNFT1P3-201ENST00000340898 1052 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMAP28067 YWHAZP6-201ENST00000399764 738 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 CYCSP10-201ENST00000417973 294 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 MARK2P12-201ENST00000420129 585 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 RPS26P4-201ENST00000431743 355 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 MRPL35P2-201ENST00000448009 511 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 RPL7L1P1-201ENST00000448259 785 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 RNA5SP96-201ENST00000516041 107 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 RN7SKP34-201ENST00000516142 244 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 OR8G3P-201ENST00000533406 921 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 AP002373.2-201ENST00000541631 1060 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 RPA2P1-201ENST00000556557 721 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 AC105036.1-201ENST00000566222 271 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 AC007066.2-202ENST00000566531 914 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 AC087283.1-201ENST00000604029 1074 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 AC245014.3-201ENST00000618589 347 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 AC022919.1-201ENST00000624979 626 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.62□□□□□ -1.67
HLA-DMAP28067 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DMAP28067 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DMAP28067 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMAP28067 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMAP28067 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMAP28067 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMAP28067 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMAP28067 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMAP28067 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMAP28067 AL672167.2-201ENST00000377164 879 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 SNORA51.9-201ENST00000384295 124 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 AC007161.1-204ENST00000423039 460 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 AL022324.2-201ENST00000434827 780 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DMAP28067 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DMAP28067 RN7SL515P-201ENST00000463999 297 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 RPSAP37-201ENST00000470913 821 ntBASIC4.61□□□□□ -1.67
HLA-DMAP28067 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms